Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01062 ATGATCTCGCAACTACGGAGTCACTACTGTTTTTTCAGCATCGTCGTTTTAGCAACAATCCTACTTGCAACGACGTCGTTTACCGATGCTCAAACCTGCAACGGCATACTCGTTTCGTACTCCGCCGGAACCGGAGTACGCCTCCCACCGAACGTCACCGATCCTAAGAAACAACCGTACCGATTCGAATCGACGTTGACTGTGCTCAACAGCGGTCTCGATGAGCTCAAGTCATGGAAGGTCTTCGTCGGATTTCGGCACGACGAGTTTTTGGTTTCTGCTTCCGGCGCCGTCCTCGCTGACGGCACCACTCTCCCTGCCGCCGTCGGGAATGGTACTGTCTTCGCTGGATATCCAATGACCGATCTCAAGACTGCTGTTGAAACTGCTGGGGATTTGACTCAGATGGAGGCGCGGATCGATCTTATCGGTACCGTGTTTGGAGTGGCGCCGCCTAGTGTTCCTTTGCCGTCCTCCATCAACCTCGCCAATGATGGTTTCATCTGCGGTAAAGCCACCGGTCAAGGGAAGAATGGGACTAATGTGTGTTGTACAAGAGATCCAAAGTTCAAAACAAACATTACTACAGATGAGAAGTTTCTGCCTCGTCAAGATGGTGATCTTACTATTATGTATGATGTGATAAGATCTTATGATTCGAATTATTGGGCCGAGGTTACTATTTCGAACCATAATCCTCTTGGAAGGCTTGATAATTGGAATTTGAATTGGGATTGGATGAATGATGAGTTTATTTTTACGATGAAAGGTGCTTATCCGTCTGTTGTGGATGCTTCTGATTGTATTTTCGGTAAGCAGGGTACATTTTACAAGGATCTTGATTTTGCGACTGTTTTGAATTGTCAGAGGAGGCCTACGATTATTGATCTTCCTCCTACTAAGTTCAATGATACCGATCTTGGGAAGATTCCGTCTTGTTGTCGGAATGGTACCATATTGCCGCAGTCTATGGATCCTAGCAAGTCGATTTCGAGATTCCAAATGCAAGTGTATAAGATGCCGCCGGTGCTTAACCGATCAGAGCTTTCTCCGCCGCAGAACTGGAAGATTAGTGGTTCGCTTAATCCTGACTATAAATGCGGTCCTCCGATTCGTGTTAGCCCTACTGCGAATCCAGATCCGACAGGGTTGCCGTTGAACAAAACTGTAATGGCGAGTTGGCAGGTTGTGTGTAACATAACAACAGCCAAGGGGACGTCAAATAAATGCTGTGTCTCGTTTTCAGCTTATTACAATGAATCAGTTATTCCATGCAAAACGTGTGCATGTGGATGCGCCAAAAATGTGGGAAATACTTGTAGTACGACTGCACCTGCTATGTGGCTTCCGTCGGACGCACTACTTGTTCCTTTCGACAACCGAACTGCCAAGGCTAAGGCATGGGCGAGTCTGAAACATCTACCAGTGCCAGATCCAATGCCTTGCAGTGATAACTGTGGTGTGAGCATAAACTGGCATTTACTTACAGATTACAATAAAGGATGGAGTGCAAGGGTCACACTTTTCAATTGGGGTGATACTAATTTTGCAGACTGGTTTGCTGCTGTGCAAATGGACAAAGCTACTGCCGGTTTTGAGAAAATGTATTCGTTTAATGCAAGCGCCATAGAAATAAACGGCAGGAATAATACGATAATAATGCAAGGTTTGGAGGGGTTGAACTATCTTGTCGGAGAAACAGACGGAGCTGACCCTCGGAGAGATCCTAGGGTACCTGGCAAACAACAGTCAGTAATGTCGTTCACAAAGAAAACTACTCCTGGAATTAGCGTCGTTCACGGTGATGGGTTTCCCACGAAAGTGTTCTTCAATGGGGAGGAATGTTCTCTTCCTTCTGTGTTTCCAACCAGTAGTGCTTCCAGGAAGGAATTCTCCTTCGCTACTTTGATGCTTCTACCATTGTTGTTAGCCGTTTTTATGTGGTAA 1947 0.4612 MISQLRSHYCFFSIVVLATILLATTSFTDAQTCNGILVSYSAGTGVRLPPNVTDPKKQPYRFESTLTVLNSGLDELKSWKVFVGFRHDEFLVSASGAVLADGTTLPAAVGNGTVFAGYPMTDLKTAVETAGDLTQMEARIDLIGTVFGVAPPSVPLPSSINLANDGFICGKATGQGKNGTNVCCTRDPKFKTNITTDEKFLPRQDGDLTIMYDVIRSYDSNYWAEVTISNHNPLGRLDNWNLNWDWMNDEFIFTMKGAYPSVVDASDCIFGKQGTFYKDLDFATVLNCQRRPTIIDLPPTKFNDTDLGKIPSCCRNGTILPQSMDPSKSISRFQMQVYKMPPVLNRSELSPPQNWKISGSLNPDYKCGPPIRVSPTANPDPTGLPLNKTVMASWQVVCNITTAKGTSNKCCVSFSAYYNESVIPCKTCACGCAKNVGNTCSTTAPAMWLPSDALLVPFDNRTAKAKAWASLKHLPVPDPMPCSDNCGVSINWHLLTDYNKGWSARVTLFNWGDTNFADWFAAVQMDKATAGFEKMYSFNASAIEINGRNNTIIMQGLEGLNYLVGETDGADPRRDPRVPGKQQSVMSFTKKTTPGISVVHGDGFPTKVFFNGEECSLPSVFPTSSASRKEFSFATLMLLPLLLAVFMW 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01062 648 PANTHER COBRA-LIKE PROTEIN 7 27 645 - -
Vivi1g01062 648 Pfam COBRA-like protein 222 401 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01062 Vivi-Chr1 22599505 22602006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01062 33 632 COBRA Gene Family AT4G16120 67.940 0.0 874
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01062 - - gmx:100814396 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01062 1 22599505 22602006 Vivi1g01062 1 22599505 22602006 ECH
Vivi1g01062 1 22599505 22602006 Vivi4g02824 4 133779322 133781386 PCT