Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01046 ATGGCCAAGTCAAAGAATCACACCGCTCACAACCAGTCTTACAAGGCCCACAAGAATGGCATCAAGAAGCCAAAGAGACATCGCCACACTTCAACCAAAGGGATGGATCCAAAGTTTTTGAGGAACCAGAGGTATGCAAGGAAGCACAACAAGAAAAACGGGGAAGTTGCATCTGATGCAGAATAG 186 0.4624 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKNGEVASDAE 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01046 61 MobiDBLite consensus disorder prediction 1 61 - -
Vivi1g01046 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 56 IPR002673 GO:0003735|GO:0005840|GO:0006412
Vivi1g01046 61 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Vivi1g01046 61 Gene3D - 1 61 - -
Vivi1g01046 61 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01046 Vivi-Chr1 22343100 22343706 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01046 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 85.246 3.49e-32 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01046 K02905 - gmx:100499874 124.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01046 1 22343100 22343706 Vivi1g01046 1 22343100 22343706 ECH