Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01030 ATGGCTGAAAACAAGGTTGTTATAAGAGAGTTTGATGAAGATAGAGATGTTAAAGTTGTTGGAAAGCTTGAAAGAAACTGTGAGATTGGAACTACTAAAAAGGGTTTCTCCATTTTCACCAACATGATCACTGACCCTTTATCTAGGATTAGGTTTTATCCCATTCGTGTTATGTTGGTTGCTGAGCTGGTTGAATGCAGGGAGCTTGTTGGAGTTGTTAGAGGATGCATTAAAAGTGTGCAAACTTCTTCTGGATCACTCTTCAAGATGGGTTGCATACTAGGCCTTAGAGTCTCTCCGACACACAGGAGAAAGGGGGTTGGACTAAAACTTGTAACCTCAATTGAAGAATGGATGCTAAGAAATGGTGCTGATTATGCATTCCTAGCCACAGAAAAGAACAACACTGCCTCAAAAAACCTATTCACCAACAAATGCAACTATGTCAATCTCAGTTCACTCATCATATTTCTCCACCCAACTACTTTCCCTATAACAAACCACATTTCCAAGAACATCAAAATAGACAAAATAAATATAGACCAAGCAATTTCCATATACACAAGACTCTTGAAAACCAAAGATTTGTATCCATTAGATATGGACATTATTCTCAAAGAGAAACTAAGTTTAGGAACTTGGGTTACTTATTACAAAGATCAAGACTTCAAACTCAACAGCACCGACGATATTGTTACCGATAAAATCGCAACAAACTCATCATGGATCATTTTTAGTTTATGGAACACTTGTGAACCTGATGATAACAACAATAATAACAAGGTTCAAGATGCTAAAACAAAACTATCTCAACCACTTAGGTTTCTTCATGCTACATTAAATCATGCAAAGGACAAAATATGTCCATGTCTGAAAATGCTGAGGAATGAGTCATTAATGTGTAATAGTTTTGGGTTTCTTTTTCTCTATGGACTTCATGGAGAAGGAGAGAATCTAGAAGGGCTAATGGAATCAGTATGGAGGTTCACATCAAGATTAGGAGAAAAGCTAAAGGAATGTAGAGTTGTGATAACTGAATTAGGGTTTGGTGATCCACTTGTAAACCATGTTCCTCAAATTGATTCTATGACTTGTGTTGATGATATGTGGTACACAAAAAGACTTGGAAATCAAAGTGATGATGAAGTGGTGGAGATGATGAAGAAGCAACTGGGGAATGTGTTTGTTGATCCTAGAGATTTTTAG 1206 0.3673 MAENKVVIREFDEDRDVKVVGKLERNCEIGTTKKGFSIFTNMITDPLSRIRFYPIRVMLVAELVECRELVGVVRGCIKSVQTSSGSLFKMGCILGLRVSPTHRRKGVGLKLVTSIEEWMLRNGADYAFLATEKNNTASKNLFTNKCNYVNLSSLIIFLHPTTFPITNHISKNIKIDKINIDQAISIYTRLLKTKDLYPLDMDIILKEKLSLGTWVTYYKDQDFKLNSTDDIVTDKIATNSSWIIFSLWNTCEPDDNNNNNKVQDAKTKLSQPLRFLHATLNHAKDKICPCLKMLRNESLMCNSFGFLFLYGLHGEGENLEGLMESVWRFTSRLGEKLKECRVVITELGFGDPLVNHVPQIDSMTCVDDMWYTKRLGNQSDDEVVEMMKKQLGNVFVDPRDF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01030 401 CDD NAT_SF 58 129 - -
Vivi1g01030 401 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 176 IPR000182 GO:0016747
Vivi1g01030 401 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 401 - -
Vivi1g01030 401 Gene3D - 6 159 - -
Vivi1g01030 401 Pfam Acetyltransferase (GNAT) family 67 148 IPR000182 GO:0016747
Vivi1g01030 401 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 5 143 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01030 Vivi-Chr1 22000649 22002361 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vivi1g01030 Acetyltransf_1 1.4e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01030 - - psat:127073193 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01030 1 22000649 22002361 Vivi1g01030 1 22000649 22002361 ECH