Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01003 ATGACATCACCATCTACTACAATACCAAACATACTAACAAACACGAACAGGAACGCGGACACAGACACGAACACAGATACACGTGGCTTTAGTAGAAAGAAAACAAAGAACAAGAAGCATCATCATCAAGATTCTCAGATTCAGATCAACCCCAAATGGAAATCCCAAGCGCAGCAACAACTCTACTCCACCAAGCTCCGTCGCGCCATAACATCCCTCAATTCAACTACCACTCCCCGCCGGGGAAAAGCCGTACGTGAAGCAGCCGACAGAGCTCTCGCTGTCACAGCGAAAGGAAGATCCCGATGGAGCCGAGCCATACTGATGACTCGGCTCAAACTCAAGTTTAGGAAGAATAAGAATAATAAGAAGAAGGTACATCGCGTAACCGCTTTATTGCCGTCAGCGCGATCGAAGAAATCGAGAGTGAATGTGTTCCGGTTGAAAGGAAAGGTGGTTCCCGGGGTGCAGAGTAAAGTACGGTTTCTTGGAAGGTTGGTTCCTGGTTGTAAGAAGGAACCGTTGCCGGTGATTTTGGAGGAAGCTATTGATTATATACCGGCGCTTGAGATGCAGGTTCGAGCCATGAGTGCGCTTTTTAATCTGTTATCGGCGGCGTCTACTTCCGGCGCCGGTGGAACTTCCGGTTCCGATTGA 657 0.4855 MTSPSTTIPNILTNTNRNADTDTNTDTRGFSRKKTKNKKHHHQDSQIQINPKWKSQAQQQLYSTKLRRAITSLNSTTTPRRGKAVREAADRALAVTAKGRSRWSRAILMTRLKLKFRKNKNNKKKVHRVTALLPSARSKKSRVNVFRLKGKVVPGVQSKVRFLGRLVPGCKKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSAASTSGAGGTSGSD 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01003 218 MobiDBLite consensus disorder prediction 1 25 - -
Vivi1g01003 218 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 55 203 IPR044660 GO:0006355
Vivi1g01003 218 CDD bHLH_AtIBH1_like 147 199 IPR044549 GO:0006355
Vivi1g01003 218 MobiDBLite consensus disorder prediction 1 56 - -
Vivi1g01003 218 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 205 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01003 Vivi-Chr1 21403065 21404078 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g01003 52 218 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 48.588 1.39e-46 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01003 - - gmx:100803765 217.238