Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00997 ATGGAGAATTCTTCAGCATTAGCATTTTCTGATGATGAGATTCAAAACAACATGAACATGGAAAGTTGCACAATTGATTTCCCTTTCGCACCTGCCTTACCATCATGCAGCGTCTTTAACTTGCCACCACCACCATCACCACTGTCTGATCCTCATAATCTAAATGATGCTTCTTTTGCTGGTTACATGGAAGATTTCAATTTCAACACCTCTTGGTTCCCATACTACAACTTTGAAACCGGCACGTCAGAATCACTACCTGCTTGTGCTGCCACCCAAACTGACCTGCAGCTCCCTCCTTTGCCGGTTCTGTCCCCTGCCATGCCGTCTGAGGCTTTGAATAGTCAGGCGACTGCTGTATCGGGTTCCTCTTCGAATACTTCGTTGTTGAATGACGCTGGTGCTGTTGCTAACAAACCAGTTGTTGCAGTAGCTGGGAATGAAGATGGAGTTCAATCTGTTGAAGGAAAACAAGCTGAAGCTGAAGTTCGCGATCACAATGAAGATCATCGAATCGAAGTGGTGGAGAATCGAAATGATCAAAATCAGACTAAGAAACCGGTGAAACCAAAGAGGAAGTACAAGCCGAGGCAAAGACCGGCAAAAGTTACTTTCAAGATGGAAACTGAAGTTGATCACTTGGATGATGGTTTTAGGTGGCGCAAGTATGGCCAGAAACCGATCAAAAACAGCCCTTTTCCCAGGAGCTATTACCGTTGCACCACTCTCGGTTGTGGTGTAAAGAAGCACATAGAGCGTTTTGCGCCGGAGCCTTCCATGCTGCTAACCAGTTATGAAGGAAGCCACAACCACCTAGCTCCGATGGTGACTCGTACTGCTAGACTCGAAATCATGCATGATGATGCTATTGCTGCTGGTGTCCAGAAAATCCACCATAACCAGATCAAAGCAAATGGTGTTGGTGTTGCTGGAAACCAATTTGCAATGTCTCAGTCGCTACCGCAACAGTTTCAGAACCAGAATCAGAATGTGATCCTTCAGAAACCTGCATTGCCATCTTTGTTGTACAATAATGATTATAATAACTCCTTCAACATTGCTTCAACAATGAATGTTAACTCTGCTGACAACTTTCCACCTTTGAATGTTGTTAACTCTCCTGCAGCTCATAATTCTCCACCTATGAATGTTGTAAGCTCTTCTGCAGCTCGTAATTCTCCACCTATGAACGTTGTTAACTTTTCTGCTGCTCATAATTCTCCACCATTGAACGTTGTTAACTCTTCTGCTGCTCACAATTCTCCAACTTTGAATGTTGTTAAGAATGCCGACAATTTCATCAACTCTTCGACAACATTTAGCGAATTCCTTCAAAATCTAAGTGGATGCAATTTTTCAACGTTGACAAATAATTTGATGAGCAACGATGGACTTCTTCAGGATATGATCATGCCATGGGAGATGAGAGGAGCTTCGAGTGAAGCTGGAGCTGGAGCAGGAGCAGTATCTTGA 1473 0.4372 MENSSALAFSDDEIQNNMNMESCTIDFPFAPALPSCSVFNLPPPPSPLSDPHNLNDASFAGYMEDFNFNTSWFPYYNFETGTSESLPACAATQTDLQLPPLPVLSPAMPSEALNSQATAVSGSSSNTSLLNDAGAVANKPVVAVAGNEDGVQSVEGKQAEAEVRDHNEDHRIEVVENRNDQNQTKKPVKPKRKYKPRQRPAKVTFKMETEVDHLDDGFRWRKYGQKPIKNSPFPRSYYRCTTLGCGVKKHIERFAPEPSMLLTSYEGSHNHLAPMVTRTARLEIMHDDAIAAGVQKIHHNQIKANGVGVAGNQFAMSQSLPQQFQNQNQNVILQKPALPSLLYNNDYNNSFNIASTMNVNSADNFPPLNVVNSPAAHNSPPMNVVSSSAARNSPPMNVVNFSAAHNSPPLNVVNSSAAHNSPTLNVVKNADNFINSSTTFSEFLQNLSGCNFSTLTNNLMSNDGLLQDMIMPWEMRGASSEAGAGAGAVS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00997 490 FunFam WRKY transcription factor 57 200 274 - -
Vivi1g00997 490 Pfam WRKY DNA -binding domain 215 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi1g00997 490 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 132 316 IPR044810 GO:0003700
Vivi1g00997 490 ProSiteProfiles WRKY domain profile. 209 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi1g00997 490 MobiDBLite consensus disorder prediction 175 199 - -
Vivi1g00997 490 SUPERFAMILY WRKY DNA-binding domain 208 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi1g00997 490 Gene3D WRKY domain 199 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi1g00997 490 SMART WRKY_cls 214 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00997 Vivi-Chr1 21194208 21196439 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00997 181 278 WRKY Transcription Factor Family AT2G47260 57.143 6.48e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi1g00997 WRKY 1.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00997 - - vvo:131660130 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00997 1 21194208 21196439 Vivi1g00997 1 21194208 21196439 ECH
Vivi4g02915 4 136364510 136366407 Vivi1g00997 1 21194208 21196439 PCT