Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00993 ATGCTATATATAGAACAGTGCATAGCATGCCAATTCAACAAACATCCCTTAACATTAATGTCCCAAAACATGGCCATGCAGTTGGTAACATTATTGTGTGTAATGATACTCAACCTCACTTCAGTGTTTGCAACCACAGTGAATGAAGCTTATGGTGGTGATATTAATACTGGATGTCCATTAGAGACTAACATATACCAATATTCTTGCCCTCAAGCAGAGGCCATAATCTTTTCTTGGGTTGAACAAGCTGTCTCTAGTGACCCAAGAATGGCAGCTTCGTTGCTAAGGCTTCATTTCCATGATTGCTTTGTCAATGGTTGTGATGCTTCAGTGTTGCTGGATGACACACAAGACTTTGTTGGTGAGAAAACTGCAGCTCCAAACTTGAATTCACTTAGAGGATTTGAAGTGATCAATGAAATCAAATCTGAACTAGAACTAGTTTGTCCACAAACTGTTTCTTGTGCTGACATACTAGCAACTGCTGCTAGAGATTCGGTTCTTCTGTCGGGAGGACCAACTTGGGAGGTGCAAATGGGAAGAAAGGATAGTATAACCGCTAGCAAGGTAGGTGCAAATAATAACATTCCAGGCCCAAACTCAACCGTTGATGTACTTGTGTCCAAGTTTGAAAACGTTGGCCTTACACTTCAAGACATGGTTGCACTCTCAGGTGCGCACACAATAGGAAAAGCCCGGTGCTCGACATTTAGTTCTCGCTTACAAAGCAACAGCATCTCAGATGGTCCATATGTTGATATGGAATTTGTCGCATCGTTGCAACAGTTGTGCTCAGGACAAGGTAATAGCAACCAAATTGCACATCTGGACCTGACCACACCAGCTACATTTGATAACCAATATTATGTTAATCTTCTCTCTGGGGAAGGACTTCTTCCATCAGACCAGACTCTAGTGAGTGGGAATGATCAGACACGGGAGATTGTTGAAACCTACGTAGAGAACCCGTATGCTTTCTTTGAAGACTTCAAGATTTCTATGATAAGAATGGGAAGCTTGGGATCGGATGCGCAGAGTAACGGACAGATTCGCCGGGACTGCCGGACTATTAACTAA 1080 0.4269 MLYIEQCIACQFNKHPLTLMSQNMAMQLVTLLCVMILNLTSVFATTVNEAYGGDINTGCPLETNIYQYSCPQAEAIIFSWVEQAVSSDPRMAASLLRLHFHDCFVNGCDASVLLDDTQDFVGEKTAAPNLNSLRGFEVINEIKSELELVCPQTVSCADILATAARDSVLLSGGPTWEVQMGRKDSITASKVGANNNIPGPNSTVDVLVSKFENVGLTLQDMVALSGAHTIGKARCSTFSSRLQSNSISDGPYVDMEFVASLQQLCSGQGNSNQIAHLDLTTPATFDNQYYVNLLSGEGLLPSDQTLVSGNDQTREIVETYVENPYAFFEDFKISMIRMGSLGSDAQSNGQIRRDCRTIN 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00993 359 ProSitePatterns Peroxidases proximal heme-ligand signature. 220 230 IPR019793 -
Vivi1g00993 359 ProSitePatterns Peroxidases active site signature. 92 103 IPR019794 GO:0004601
Vivi1g00993 359 ProSiteProfiles Plant heme peroxidase family profile. 60 359 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g00993 359 Pfam Peroxidase 81 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g00993 359 PRINTS Plant peroxidase signature 153 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g00993 359 PRINTS Plant peroxidase signature 333 346 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g00993 359 PRINTS Plant peroxidase signature 276 291 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g00993 359 PRINTS Plant peroxidase signature 94 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g00993 359 PRINTS Plant peroxidase signature 292 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g00993 359 PRINTS Plant peroxidase signature 219 231 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g00993 359 PRINTS Plant peroxidase signature 134 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g00993 359 PRINTS Plant peroxidase signature 172 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g00993 359 PRINTS Plant peroxidase signature 70 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g00993 359 Gene3D - 66 359 - -
Vivi1g00993 359 Gene3D Peroxidase, domain 2 198 339 - -
Vivi1g00993 359 PRINTS Haem peroxidase superfamily signature 172 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g00993 359 PRINTS Haem peroxidase superfamily signature 154 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g00993 359 PRINTS Haem peroxidase superfamily signature 92 106 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g00993 359 PRINTS Haem peroxidase superfamily signature 220 235 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g00993 359 PRINTS Haem peroxidase superfamily signature 278 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi1g00993 359 CDD secretory_peroxidase 61 356 IPR033905 GO:0004601|GO:0042744
Vivi1g00993 359 PANTHER PEROXIDASE 72-RELATED 60 357 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vivi1g00993 359 FunFam Peroxidase 64 214 - -
Vivi1g00993 359 SUPERFAMILY Heme-dependent peroxidases 61 359 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi1g00993 359 FunFam Peroxidase 198 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00993 Vivi-Chr1 21113794 21115264 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00993 61 359 Peroxidase AT4G16270 64.686 9.70e-140 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00993 K00430 - gmx:100787637 552.747