Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00926 ATGGAGTTAACTCCAAGAGGAAGAAATCAAGGTCATGTTGTGACTTTTGACAGAGATGCAGATTCATTTGTGGAGGAAGATAAAGAGCTTCAATCTAAATGGGCTGCTATAGAGAAATTACCAACTTTCAAAAGGATTAAAACTTCTTTTGTTGATGAAATCACTCAGGAGGAAAGTGGTAGTAGATGGCAAAGGAGTAGTAGTAAAAGGGTTGTTGATGTTACTAAGCTTGGAGCTGTTGATAAGCGGTTGTTTATTGATAAGCTCATCAAGCATATTGAGAATGATAATCTTAATTTGTTGCAGAAACTTAGAGAAAGGATGGAAAGAGTGAATGTGAAGCTACCTAGTGTGGAGGTAAGGTACAAGAACCTGAATGTAGAAGCAGAATGTGAGGTTGTTCAAGGGAAGCCACTTCCTACTCTATGGAATTCTTTTTCTAGCTTATTTTCAGGCTTAATGAAGACTATATCATGCAGTTCTCAAGAAACCAAGTTGGGCATTCTGAAAGATGTCAGTGGCGTCATAAAGCCAGCAAGGCTTACTCTTCTTCTGGGTCCACCTAGCTGTGGGAAAACTACCTTACTAATGGCATTGGCTGGAAAACTAGATCAATCTCTAGAGGTTTCTGGAGAAATCTGTTACAATGGTCACAGACTAGATGAATTTGTTCCTCAAAAAACATCAGCTTATATAAGTCAGTATGACCTACACATTCCTGAAATGACAGTGAGGGAAACAATTGACTTCTCGGCACGTTGTCAGGGGGTTGGAAGCAGAGCTGATATAATGACTGAAATCACTAGGAAAGAAAAAGAACAAGGAATCTTCCCTGACCCGGATATTGATACTTATATGAAGGCTATTTCTGTTGAAGGACAAAGTGAAAATCTTCAAACGGAATATGTTTTAAAGATACTTGGATTGGATATCTGTGCTGACACTCTGGTTGGAGATGCACTAGATAGAGGCATTTCAGGTGGACAGAAGAAAAGGCTAACTACAGGAGAGATGATTGTAGGTCCCATAAAAGCACTTTTTATGGATGAAATATCAACTGGCTTAGACAGCTCCACTACTTTTCAAATAGTTACATGTCTCCAGCAATTGGTGCACATCAATGATGCAACGGCAGTGCTTTCACTCCTCCAACCTGCACCAGAAACCTTTGAGTTATTTGATGATCTTATATTGATGGCAGAGGGGAAGATAGTATACCATGGCCCCTGCAGTCAAGCCATCCAGTTCTTTAAGGATTGCGGTTTCTGGTGCCCTGAAAGAAAAGGAGTGGCAGACTTTCTTCAAGAGGTAACCTCTAAGAAGGATCAAAGGCAATACTGGTACCGCACGGATATTCCTTACAGTTATGTTTCAGTGGATGACTTCTCTCAAATTTTCAAAACAAGTTACTGGGGAAGAATGTTAGATGATGAGCTCTCACAACCATATGATAAATCTCAATCACATGAAAGTTCTTTATCATATAGCAAGTACTCCTTAGGAAAATGGGATTTGTTTAATGCTTGTATGAAGAGGGAGATACTTCTCATGAAACGAAACTCGTTTATCTACATATTCAAAACTGTGCAGCTTACAATCACTGCAATCATAACAATGACGGTCTTTTTGCGCACACAACTTGATGTGGACTTGTTAGGATCAAACTATTTATTAGGTTCATTGTACTATACACTTGTACGCCTAATGACGAATGGAGTTGCCGAGTTGATAATGACTATTACTAGATTACCCGTTGTTTATAAGCAGAAAGCATTCTATCTCTATCCAGCTTGGGCTTACTGTCTTCCAGCTGCCATACTAAAGATTCCATTTTCAGTCCTTGATTCTCTTGTTTGGACATCAATAACGTATTATGTTATAGGCTACAGCCCAGAAATAACAAGGTTCCTCCGCCAGTTCCTTTTGCTTATCGCTCTGCACATGTCATCAACCTCTATGTGTCGTTCCCTTGCCGCAGTTTTTAAAACTGATGTTGCAGCTACAACTGTTGGTTCTTTGGTCTTAGTACTTATGTTCTTGTTTGGAGGCTTTATTCTTCCTCGACCATCATTGCCAAAGTGGTTGAGGTGGGGTTTTTGGCTTTCTCCCATGTCATATGGGGAAATAGGAATAACACTCAATGAATTTCTTGCTCCTCGCTGGCAAAAGATTCAAGAGGGAAACATCACCGTTGGAAGGGAGGTTCTCAAGAGTCGTGGTTTAGACTTTGACGGCAGCTTCTTCTGGATATCAATTGGGGCATTACTTGGTTTCGCAGTAGTATTTGATATACTATTTATAGTAGCATTAACTTACTTAAAAGAGCCAAAGCAATCTCGAGCTTTAGTTTCGAAAAAGAGGCTGCCTCAACTAAAAGGAGGAGAAAGAAACAATGAAGTGGAATTAAAAAATAAGTCAGTAGCAGTTGATATTAGCCACACATCGAAGGAAGCTCAAAGCTCAGGGAAAATGGTCTTGCCCTTTTTGCCACTGTCAATAGCATTTAAGGATGTCCAGTATTTTGTTGACACTCCTCCGGAGATGAAAAAGCATGGTTCGAATGAGAAAAATCTACAATTGCTCTGCGATATCACGGGAGCGTTTAGGCCAGGAATCCTGACTGCATTGATGGGAGTCAGTGGAGCAGGGAAGACAACACTCATGGATGTCCTTTCAGGAAGAAAAACGGGAGGTATCATAGAAGGAGATATAAGAATTGGAGGGTACCCTAAAGTTCAAAAGACATTTGCAAGAGTTTCAGGTTACTGTGAGCAGAACGACATACATTCGCCATATATAACAGTTGAAGAATCTGTTCGATACTCAGCTTGGTTGCGGTTGCCAAGCGAGATTGATTCAGCTACAAAAGGGAAATTTGTTGAAGAAGTCCTTGAAACAATTGAACTTGATGATATAAAGGATAACTTAGTTGGTATCGCTGGTCAAAGTGGCTTATCTACCGAGCAACGTAAAAGGCTAACTATAGCAGTAGAGCTTGTATCCAATCCTTCAATAATTTTTATGGATGAACCTACATCAGGTTTGGATGCCCGAGCTGCTGCTGTAGTTATGCGTGCAGTGAAGAATGTTGTTGGCACTGGTAGGACCACGGTTTGCACCATACATCAGCCAAGCATTGATATATTTGAGACTTTTGATGAGCTGATTCTAATGAAGTCTGGAGGCAAGATCATATATAATGGAATGCTAGGCCATCATTCAAATAGACTGATTGAATATTTTCAGAGTATATCGGGAGTTCCAAAGATCAAGGACAATTATAATCCTGCAACCTGGATGTTGGAAGCTACTTCTGCATCTGTAGAAGATGAACTTAAAATAGATTTTGCAAATATATATAAAGAGTCACACCTTCACCGGGATACCCTTGAATTGGTGAGACAGATAAGTGAACCAGAGCCAGGTTCAAAAGACTTGCATTTTTCAACTCAATTCCCACAAAATAACTTGGGGCAGTTTATGGCATGCCTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCCGAGTACAATTTAATACGATTTGTGTTCATGATTGTTGCGGCAATATTATTTGGGGCGGTATTTTGGCAGAAAGGGAAGGAAATAAATACTCAGCAGGATTTGTTCAACGTGTTTGGATCAATGTATATTGCTGTAATATTCTTGGGAATAAATTACTGTTCAACAATTCTACCGTACGTGGCAACCGAGCGCTCCGTCCTGTATCGAGAAAAGTTTGCAGGAATGTATTCTTCCATGGCTTATTCATTTGCACAGGTGGCTATTGAAATACCATATATCTTAGTGCAAGCAATTTTATATGTGGCTATCACCTATCCAATGATAGGTTTCCATTGGTCAGTTCAGAAGCTCTTTTGGTACTTCTACACCACATTCTGCACATTTCTATACTTTGTGTATCTTGGAATGCTGGTAATGTCATTAAGCTTAAATCTGGATTTAGCTTCAGTATTGTCAACTGCAGTCTACACCATATTCAATCTCTTTTCTGGATTCCTCATGCCTGGACCTAAAATTCCTAAATGGTGGGTTTGGTGCTACTGGATTTGCCCTACAGCTTGGTCCTTGAATGGCCTATTAACTTCACAATATGGAGACATGGACAAAGAAATACTCATATTTGGGGACAAAAAATCAGTTGGTTCTTTTCTAAAGGATTACTATGGATTCAGACATGACAGATTAAGTATTGTGGCTGTGGTGCTCATTGCTTATCCAATTATCTATGCATCCCTTTTTGCCTACTGTATAGGGAAAATAAACTACCAAAAGAGATAG 4302 0.3973 MELTPRGRNQGHVVTFDRDADSFVEEDKELQSKWAAIEKLPTFKRIKTSFVDEITQEESGSRWQRSSSKRVVDVTKLGAVDKRLFIDKLIKHIENDNLNLLQKLRERMERVNVKLPSVEVRYKNLNVEAECEVVQGKPLPTLWNSFSSLFSGLMKTISCSSQETKLGILKDVSGVIKPARLTLLLGPPSCGKTTLLMALAGKLDQSLEVSGEICYNGHRLDEFVPQKTSAYISQYDLHIPEMTVRETIDFSARCQGVGSRADIMTEITRKEKEQGIFPDPDIDTYMKAISVEGQSENLQTEYVLKILGLDICADTLVGDALDRGISGGQKKRLTTGEMIVGPIKALFMDEISTGLDSSTTFQIVTCLQQLVHINDATAVLSLLQPAPETFELFDDLILMAEGKIVYHGPCSQAIQFFKDCGFWCPERKGVADFLQEVTSKKDQRQYWYRTDIPYSYVSVDDFSQIFKTSYWGRMLDDELSQPYDKSQSHESSLSYSKYSLGKWDLFNACMKREILLMKRNSFIYIFKTVQLTITAIITMTVFLRTQLDVDLLGSNYLLGSLYYTLVRLMTNGVAELIMTITRLPVVYKQKAFYLYPAWAYCLPAAILKIPFSVLDSLVWTSITYYVIGYSPEITRFLRQFLLLIALHMSSTSMCRSLAAVFKTDVAATTVGSLVLVLMFLFGGFILPRPSLPKWLRWGFWLSPMSYGEIGITLNEFLAPRWQKIQEGNITVGREVLKSRGLDFDGSFFWISIGALLGFAVVFDILFIVALTYLKEPKQSRALVSKKRLPQLKGGERNNEVELKNKSVAVDISHTSKEAQSSGKMVLPFLPLSIAFKDVQYFVDTPPEMKKHGSNEKNLQLLCDITGAFRPGILTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIGGYPKVQKTFARVSGYCEQNDIHSPYITVEESVRYSAWLRLPSEIDSATKGKFVEEVLETIELDDIKDNLVGIAGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVGTGRTTVCTIHQPSIDIFETFDELILMKSGGKIIYNGMLGHHSNRLIEYFQSISGVPKIKDNYNPATWMLEATSASVEDELKIDFANIYKESHLHRDTLELVRQISEPEPGSKDLHFSTQFPQNNLGQFMACLWKQHLSYWRSPEYNLIRFVFMIVAAILFGAVFWQKGKEINTQQDLFNVFGSMYIAVIFLGINYCSTILPYVATERSVLYREKFAGMYSSMAYSFAQVAIEIPYILVQAILYVAITYPMIGFHWSVQKLFWYFYTTFCTFLYFVYLGMLVMSLSLNLDLASVLSTAVYTIFNLFSGFLMPGPKIPKWWVWCYWICPTAWSLNGLLTSQYGDMDKEILIFGDKKSVGSFLKDYYGFRHDRLSIVAVVLIAYPIIYASLFAYCIGKINYQKR 1433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00926 1433 Pfam ABC transporter 863 1013 IPR003439 GO:0005524
Vivi1g00926 1433 Coils Coil 101 121 - -
Vivi1g00926 1433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 857 1068 IPR027417 -
Vivi1g00926 1433 Gene3D - 153 419 IPR027417 -
Vivi1g00926 1433 Pfam ABC-2 type transporter 384 437 IPR043926 GO:0140359
Vivi1g00926 1433 Pfam ABC-2 type transporter 1042 1106 IPR043926 GO:0140359
Vivi1g00926 1433 Pfam Plant PDR ABC transporter associated 721 783 IPR013581 -
Vivi1g00926 1433 SMART AAA_5 178 411 IPR003593 GO:0016887
Vivi1g00926 1433 SMART AAA_5 870 1062 IPR003593 GO:0016887
Vivi1g00926 1433 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 426 IPR027417 -
Vivi1g00926 1433 Pfam ABC transporter 169 351 IPR003439 GO:0005524
Vivi1g00926 1433 CDD ABCG_PDR_domain2 830 1068 IPR034003 -
Vivi1g00926 1433 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 21 1433 - -
Vivi1g00926 1433 FunFam ABC transporter G family member 34 156 460 - -
Vivi1g00926 1433 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 154 426 IPR003439 GO:0005524
Vivi1g00926 1433 FunFam ABC transporter G family member 34 847 1079 - -
Vivi1g00926 1433 Gene3D - 847 1080 IPR027417 -
Vivi1g00926 1433 Pfam ABC-transporter N-terminal 79 144 IPR029481 -
Vivi1g00926 1433 Pfam ABC-2 type transporter 1159 1371 IPR013525 GO:0016020|GO:0140359
Vivi1g00926 1433 Pfam ABC-2 type transporter 505 716 IPR013525 GO:0016020|GO:0140359
Vivi1g00926 1433 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 833 1086 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00926 Vivi-Chr1 19504187 19516933 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00926 857 1045 Calmodulin-binding Proteins AT2G36910 28.431 6.50e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00926 K08711 - gmx:100779615 2485.68