Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00916 ATGGTGATATTGAACCTTGGAAAGAAGCAGATTAAGAAGAAGTTGGAGAATGAAGGAGTGAGAGTTGGGAAATATGAATTGGGTAGGACTCTTGGTGAGGGTAATTTCGGTAAAGTAAAGTTTGCTAAGAACACTGATTCTGGACAACCTTATGCTGTTAAGATTATCGACAAGAACAAGATCGTTGATCTCAATATTACCAACCAGATAAAGAGAGAGATAGCTGCCTTAAAGCTCTTAAGGCATCCCAATGTTGTTAAATTATATGAGGTCTTGGCTAGTAAAACAAAAATTTGCATGGTACTTGAGTATGTGACTGGACAAGAGTTATTTCACAAAATTGCTTCCAAAGGTAAACTTAATGAAACTGAAGGTAGAAAGTTGTTTCAGCAGTTGATTGATGGTGTGAGTTACTGCCATAGTAAAGGTGTCTTCCATAGAGATATCAAGCTTGAGAATGTACTTGTGGATGCGAAAGGAAATCTAAAGATAACTGATTTTGGCCTTAGTGCTTTACCCCAACAATTTGCGGAAGATGGGTTGTTGCATACAACATGTGGAAGTCCAAACTATGTTGCGCCAGAGATTCTTGCTAATAGGGGATATAATGGTGCATCATCTGATGTATGGTCATGTGGTGTTATCTTGTATGTAGTTCTAACAGGATACCTACCTTTTGATGATAGAAATCTCGCAGTTCTCTATCAGAAGGTTTCAAAAGGAGATTGTCAGATACCGAAATGGTTATCATCTGGTGCCCAAAATATTATAAAGAGGATTCTTGATCCCAACCCTGAAACCAGAATAACAATGGCGGGGATCAAAGAAGACTTGTGGTTCAAGGAAGGATATAATCAAGCGGATCCTGAGGACGAGGATGAGGATGTATACGTTGACAATCAAGCCTTTTCTGTCAATGAATTGACACATGAAGAAGAAAAAAGGAGTTCAGAATCTCCAATCCGTATCAATGCATTTCAGTTGATAGGGATGTCTTCAAGCCTAGACCTGTCTGGACTTTTTGAGAACGAGGATGTATCCGAGAGGAAGATAAGGTTTACAACTAACCTTTCAGACAAAGATCTGATGAAAAAGATTGAAGATTCTATGGTAGAAACGGAATTTAGAGTTCAAAAGAAAAACGGCAAAATAAAAGTGATACAAGAAAATAAGGAGCATAAAACCCCTGGCAGCCTCTCGGTGACAATAGAGGTTTTTGAAATAAGTTCATCGTTGTATGTAGTAGAAATAAGGAAGTGTTATGGAGATGCATCTGTATATAGACAGTTATGCAAGAAATTATTAAACAATCTGGGCGTTCCCCAAGGAAAGCACTAG 1338 0.3819 MVILNLGKKQIKKKLENEGVRVGKYELGRTLGEGNFGKVKFAKNTDSGQPYAVKIIDKNKIVDLNITNQIKREIAALKLLRHPNVVKLYEVLASKTKICMVLEYVTGQELFHKIASKGKLNETEGRKLFQQLIDGVSYCHSKGVFHRDIKLENVLVDAKGNLKITDFGLSALPQQFAEDGLLHTTCGSPNYVAPEILANRGYNGASSDVWSCGVILYVVLTGYLPFDDRNLAVLYQKVSKGDCQIPKWLSSGAQNIIKRILDPNPETRITMAGIKEDLWFKEGYNQADPEDEDEDVYVDNQAFSVNELTHEEEKRSSESPIRINAFQLIGMSSSLDLSGLFENEDVSERKIRFTTNLSDKDLMKKIEDSMVETEFRVQKKNGKIKVIQENKEHKTPGSLSVTIEVFEISSSLYVVEIRKCYGDASVYRQLCKKLLNNLGVPQGKH 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00916 445 SUPERFAMILY Protein kinase-like (PK-like) 21 309 IPR011009 -
Vivi1g00916 445 ProSitePatterns Protein kinases ATP-binding region signature. 31 54 IPR017441 GO:0005524
Vivi1g00916 445 Pfam Protein kinase domain 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g00916 445 Gene3D Transferase(Phosphotransferase) domain 1 105 307 - -
Vivi1g00916 445 ProSiteProfiles NAF domain profile. 318 342 IPR018451 GO:0007165
Vivi1g00916 445 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 12 423 - -
Vivi1g00916 445 Gene3D Phosphorylase Kinase; domain 1 8 104 - -
Vivi1g00916 445 FunFam Non-specific serine/threonine protein kinase 16 104 - -
Vivi1g00916 445 ProSiteProfiles Protein kinase domain profile. 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g00916 445 SMART serkin_6 25 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g00916 445 Pfam NAF domain 322 379 IPR004041 GO:0007165
Vivi1g00916 445 CDD CIPK_C 324 435 - -
Vivi1g00916 445 FunFam Non-specific serine/threonine protein kinase 18 320 - -
Vivi1g00916 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Vivi1g00916 445 FunFam Non-specific serine/threonine protein kinase 320 441 - -
Vivi1g00916 445 Gene3D Kinase associated domain 1, KA1 317 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00916 Vivi-Chr1 19427538 19433114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00916 88 439 CBL-interacting serine-threonine protein kinases AT3G17510 67.705 2.03e-168 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Vivi1g00916 Pkinase 3.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00916 K07198 - gmx:100777468 682.945