Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00876 ATGGCAACGTCCAATGTGACATGTCCTGCACCTATGAAGGCAACGTCTAATGGCGCGTTCCAACATGAAAATCCACTTGATTACGCAGTTCCTCTTATCATCCTTCAGATATGTGTGGTTGTTACATTCACTAGGTTTATTGCTTTCCTTTGTAAACCCCTCAAACAACCTCGAGTCATCGCAGAAATCATCGGAGGAATATTACTCGGCCCGTCTGCGATTGGACGGAGCCAGAAATTTCTAGACACAGTTTTTCCAAAGAGAAGCTTAACAGTCCTAGACACACTAGCAAACATTGGTCTTTTGTTCTTCTTGTTCCTAGTTGGTCTTGAACTCGACATGCGTTCGATCAAGAAAACAGGTCACAAAGCCTTAGCAATTGCGCTATGTGGAATCACGGTTCCGTTCGTGCTTGGCATTGGAACATCCTTTGTTCTTAGAGCCACAATCTCCAAAGGTGCAGAGGCTGTCCCGTTTCTTGTCTTCATGGGCGTTGCTCTCTCGATTACTGCATTTCCTGTTCTCGCTCGAATCCTAGCTGAGCTCAAACTCCTGACTACTGATGTCGGTCGTATAGCAATGTCAGCTGCTGCTGTCAATGATGTTGCAGCATGGATACTTCTTGCTCTTGCCATATCATTATCAGGCGACGACACGTCCCCGTTGATTTCTCTTTGGGTTATGCTCACCGGTGCAGCCTTTATTCTCTTTGCTGTTTTCGCTATAAGACCGTTGCTAGCATACATGGCGAAGCGTTCCCCCGAGGGTGAACCTGTCAAGGAGCTTTACATTTGTATCACACTGACATTGGTTTTGGCTTGTAGTTTTGTTACTGATACTATTGGAATTCATGCACTATTCGGTGCTTTTGTTGTTGGTATTATTATGCCGAAAGACGGTCCTTTCGCCGGTGTTTTGATCGAGAAAATCGAAGATCTTGTGTCTGGAATTTTCTTGCCACTTTATTTTGTTTCTAGTGGTTTGAAAACAGACGTGGCAACTATTAAAGGAGGGGTTTCTTGGGCACTATTAGCACTTGTTATATTCAATGCTTGCTTTGGAAAAATCGTTGGCACAGTTGTGGTATCATTATTATGCAAGGTGCCTTTTAGAGAATCACTTGCACTTGGATTTCTTATGAACACCAAAGGATTGGTAGAGCTCATTGTTCTCAACATCGGAAAGGATCGCAAGGTACTAAATGACCAAGCATTTGCAATTTGTGTTCTTATGGCTTTATTCACAACCTTCATCACCACTCCAATTGTTATGGCAGTGTATAAACCAGCTAGAAGAGGTGCACCTTACAAGCACAAAACAATTCAACGCAAAGATCGCGATTCAGAGCTCAGAGTGCTGGCGTGTTTCCACAGCACGCGCAACATCCCTACATTGATCAACCTCGTAGAATCCTCCAGAGGAACGCGAAAGCGCGGAAGACTTTGTATCTACGCAATGCACTTGATGGAACTCTCGGAGAGATCTTCAGCTATTTCCATGGTTCACAAGGCCCGTAACGATGGCATACCGTTTTGGAATAGAACAGAGAATGATAAAGATCAAATGGTCATCGCTTTCCAAACCTACGAAAAATTGAGCAGTGTCAATGTCCGTCCCATGACAGCAATCTCAGCTCTCAACAACATTCACGAAGATATTTGCACTAGTGCACATCAAAAACGCGTTGCGATAATAATCCTCCCATTCCATAAACACCAACGCGTCGACGGAACAATGGAATCATTAGGACATTCATTCCATGTAATCAACCAGCTTGTGCTGAGTCACGCGCCGTGTTCCGTTGGAATTCTAGTCGATCGTGGTCTTGGAGGAACAAGCCAGGTTCAAGCTAGCGATGTTTCTTTTAACGTTGTCGTAGTATTCTTCGGAGGACCAGACGATAACGAAGCGCTTGCTTACGGTTTGAGAATAGCCGAACATCCTGGCATTGTACTAACTGTTGTTAAATTTATGTCTCCACCCGGAACAACATTATCATTCGGCGCAAAGTTAGTCGGTGTTGCATCGGATAAAAGCAGAACAATAGTAATCGACGATAGCGAAGGTAGTAACCATGGTGGTAACAAAAACCAAGATGAACAATACTGGACCGAGTTTTTAAATGCAAAAAGCAGCAATGAGGAATCAATTAAGTATGAAGAAAAGCTGGTTGAAAGCAAAAGTGATATTGAGACAGCATTGAAGGAATTAAGCAGAAGCAATTTGATATTGGTTGGTAGAATGCCACCAGTTGCACCTTTGGTTAGTACAAGTGATTGTCCTGAGCTTGGTCCAATTGGAAGCTATTTGAGTTCTTCTAGTTTCTCCAATTCTGCATCAGTATTGGTTATTCAACAGTATAATCCTTCAACTGATATGCATCCTTTGGTTATGGAGGAATTTGATTGTCCTGAAGTGCCTGACACGCCTAGGAATTAG 2439 0.4326 MATSNVTCPAPMKATSNGAFQHENPLDYAVPLIILQICVVVTFTRFIAFLCKPLKQPRVIAEIIGGILLGPSAIGRSQKFLDTVFPKRSLTVLDTLANIGLLFFLFLVGLELDMRSIKKTGHKALAIALCGITVPFVLGIGTSFVLRATISKGAEAVPFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAISLSGDDTSPLISLWVMLTGAAFILFAVFAIRPLLAYMAKRSPEGEPVKELYICITLTLVLACSFVTDTIGIHALFGAFVVGIIMPKDGPFAGVLIEKIEDLVSGIFLPLYFVSSGLKTDVATIKGGVSWALLALVIFNACFGKIVGTVVVSLLCKVPFRESLALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARRGAPYKHKTIQRKDRDSELRVLACFHSTRNIPTLINLVESSRGTRKRGRLCIYAMHLMELSERSSAISMVHKARNDGIPFWNRTENDKDQMVIAFQTYEKLSSVNVRPMTAISALNNIHEDICTSAHQKRVAIIILPFHKHQRVDGTMESLGHSFHVINQLVLSHAPCSVGILVDRGLGGTSQVQASDVSFNVVVVFFGGPDDNEALAYGLRIAEHPGIVLTVVKFMSPPGTTLSFGAKLVGVASDKSRTIVIDDSEGSNHGGNKNQDEQYWTEFLNAKSSNEESIKYEEKLVESKSDIETALKELSRSNLILVGRMPPVAPLVSTSDCPELGPIGSYLSSSSFSNSASVLVIQQYNPSTDMHPLVMEEFDCPEVPDTPRN 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00876 812 PANTHER CATION/H + ANTIPORTER 7 788 - -
Vivi1g00876 812 Pfam Sodium/hydrogen exchanger family 39 422 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi1g00876 812 Gene3D - 32 434 IPR038770 -
Vivi1g00876 812 FunFam Cation/H(+) antiporter 15 32 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00876 Vivi-Chr1 18729951 18735147 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00876 1 802 Antiporter Super Family AT3G17630 71.216 0.0 1147