Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00855 ATGGCTAAATTCTCTTCTAAACTCTTCCTTCTCCTCTTAACAATCTTCTATTCAAACACTTCACCTTTCACCAACTCCTCCAAATCTTCCACAACATCACTACATGCAAAAATCTCATCACTAAAATCCTTCTGCAAAACCACTCCACACCCTCAACTTTGCTTCAACTCATCAAAACTCTCCATCTCAATAACCATAAACCCAACCATCATCAACATCCTCCTCCATTCCCTTCAACTATCGATATCCGAAACCACGAAACTATCTAACCAATTCAACAATGCTGCACAACAGCACTCAAACATCATAGAAAACAAAAGAGGAGTGTTACAAGACTGCAAAGAGCTTCATCAATCAACTTTAACTTCCTTGAAAAGATCACTATCTGGAATCACTTCCTCAAACACTAGGAACTTAGTTGATGCAAGAACTTATCTAAGTGCAGCAGTTACCAACAAGAACACATGTTTAGAAAGCTTAGATTCTGCTTCTGGTACAATGAAACAAGTTCTGGTAGATTCAGTGATCAACACTTACAAATATGTTAGTAATTCTCTGTCAATGCTTCCCAAGCCTGAGATAAGAGCTTCAAGAGGACGTGAAAACCGACGTTTAATCGAGGCTGTAACATGGCTGTCGAGAAAAGATCGCGGCCGGTTCTTGCAAAGTACTGATGGTGTGCTTGTTGTGGCTGCAGATGGAAGTGGAAACTTTAGCACTATCAATGATGCCATTAACTTCGCTCCGAATAACAGCTACGATAGGATATTGATCTATGTGAAAGAAGGAGTGTATGAAGAAAATGTTGAAATTTTGAGTTATAAAACCAATATTGTTCTACTTGGTGATGGAAGTGATGTTACTTTCATTACTGGTAATAGAAGTGTTGTTGATGGCTGGACTACATTCAGATCTGCAACTTTCGCGGTTTCTGGTGAAGGCTTTCTAGCGCGCGATATATCTTTTGAGAACAAGGCAGGACCGGAGAAGCATCAAGCAGTTGCTCTAAGAGTGAATGCAGACTTAACAGCTTTTTACAAATGCGCAATGTATGGTTACCAAGACACACTTTATGTTCACTCCTTTCGACAATTCTACCGCGAATGTGACATTTTCGGGACCATAGATTACATATTTGGAAATGCGGCAGTAGTTTTACAAGCATGTAACATTGTTTCAAGAATGCCGTTAGCCGGTCAATTCACTGTCATCACAGCACAGTCAAGAGATTCTCCTGATGAAGACACCGGCATCTCAATTCAAAACTGTTCGATTTTAGCTACTACTGATTTGTATAACAACTCTAACAACATCAAGAGTTACCTTGGAAGGCCTTGGAGGGTTTATTCTAGGACTGTTTTCATTGAGTCTTACATTGATGTGTTTATTGATCCAATGGGATGGACAAAGTGGTCTTCTCATGATGATCAAGAGTTGGACACTTTGTATTATGGAGAGTTTGCGAACTATGGACCCGGTTCTGCGACGGATAGCCGAGTTAAATGGTTAGGATACCATTTAATGGATTTTGATAGTGCATATAATTTCACTGTTTCTGAGTTCATCATTGGTGATGCTTGGATTGGATCTACTTCATTTCCTTATGATGAAGGGATTTGA 1620 0.3957 MAKFSSKLFLLLLTIFYSNTSPFTNSSKSSTTSLHAKISSLKSFCKTTPHPQLCFNSSKLSISITINPTIINILLHSLQLSISETTKLSNQFNNAAQQHSNIIENKRGVLQDCKELHQSTLTSLKRSLSGITSSNTRNLVDARTYLSAAVTNKNTCLESLDSASGTMKQVLVDSVINTYKYVSNSLSMLPKPEIRASRGRENRRLIEAVTWLSRKDRGRFLQSTDGVLVVAADGSGNFSTINDAINFAPNNSYDRILIYVKEGVYEENVEILSYKTNIVLLGDGSDVTFITGNRSVVDGWTTFRSATFAVSGEGFLARDISFENKAGPEKHQAVALRVNADLTAFYKCAMYGYQDTLYVHSFRQFYRECDIFGTIDYIFGNAAVVLQACNIVSRMPLAGQFTVITAQSRDSPDEDTGISIQNCSILATTDLYNNSNNIKSYLGRPWRVYSRTVFIESYIDVFIDPMGWTKWSSHDDQELDTLYYGEFANYGPGSATDSRVKWLGYHLMDFDSAYNFTVSEFIIGDAWIGSTSFPYDEGI 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00855 539 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 189 IPR035513 -
Vivi1g00855 539 SMART PMEI_2 36 188 IPR006501 GO:0004857
Vivi1g00855 539 PANTHER PECTINESTERASE 16 529 - -
Vivi1g00855 539 Pfam Pectinesterase 228 525 IPR000070 GO:0030599|GO:0042545
Vivi1g00855 539 CDD PMEI-like_3 43 188 - -
Vivi1g00855 539 Pfam Plant invertase/pectin methylesterase inhibitor 40 188 IPR006501 GO:0004857
Vivi1g00855 539 SUPERFAMILY Pectin lyase-like 224 537 IPR011050 -
Vivi1g00855 539 FunFam Pectinesterase 222 539 - -
Vivi1g00855 539 ProSitePatterns Pectinesterase signature 2. 371 380 IPR033131 -
Vivi1g00855 539 NCBIfam pectinesterase inhibitor domain 9 188 IPR006501 GO:0004857
Vivi1g00855 539 Gene3D - 223 539 IPR012334 -
Vivi1g00855 539 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 191 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00855 Vivi-Chr1 18368704 18370879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00855 27 539 Carbohydrate Esterase AT2G26440 63.327 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00855 - K01051 gmx:102666380 784.252