Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00845 ATGGCTTCGTCGGAGAATTATGAACGTTCTCACTCTCCTTCTCTCTCTGACGAAACGCTCCCTCCTTCTAATTTATGTATGCAGAAATTTAGGCTTTACGAGACTCGATCGAACTTTTACATGATTGGAAGGGACAAGAGTAGGGCATACTGGAGGGTACTAAAGATTGACCGTCTAGATCCTTCTGAGCTAAATGTGCGTGAAGATTCCACCACATATTCAGAAAGGGAGTGTTCTGATCTTTTGAGGCGGATACATGAGGGGAACAAGTCCACTGGCGGACTTAAATTTGTTACAACTTGTTATGGAATTGTTGGATTCATCAAACTTTTGGGGCCTTACTACATGCTACTTATCACAAAAAGAAGGCAAATTGGTGCAATCTGTGGTCATACAGTATATGCTATCTCAAAGACTGAGATGATTCCATTGCCGAATTCTTCTGTTCGGTCTAACATCACCGATTCTAAAAATGAAAACAGGTACAAGAAGCTTCTATGCACAGTTGACCTTACAAAGGACTTCTTTTTCAGCTACTCATACCATATTATGCGTAGTCTTCAAAGGAACATGTGCGGCGCTGAGACAGGCCATGTCCTTTACGAGACGATGTTTGTTTGGAATGAATTCTTGACTCGAGGAATTAGGAATCACCTTCAGAATACTTTTTGGACAGTTGCACTAGTTTATGGCTTCTTTAAACAGGACACACTTGAGATATCTGGACGGGAGTTCATACTTACGCTCATTGCGAGAAGATCTCGCCATTATGCTGGGACTAGGTATTTGAGGCGAGGTGTTAATGACAAGGGCAGAGTAGCAAATGATGTCGAGACAGAACAAATAGTCTTTGAGGATGTTCCAGAAGGTTTTCCGATCCAAATAAGCTCTATCATCCAGAATCGTGGCTCAATCCCTCTTTTCTGGTCACAGGAAACTTCACGTTTAAATATTAAACCAGATATTATACTGTCAAAGAAGGACCAGAACTATCAAGCCACTAGACTTCACTTTGAAAATCTTGTCAAAAGATACGGAAATCCCATTATAATTTTGAATTTAATAAAGACCCATGAGAAGAAGCCTCGTGAGGCCATCCTTCGTCAAGAGTTTGCTAATGCTATAGACTTCATCAATAAAGATTTGTCTGAGGAAGACAGGCTTAGGTTTCTTCATTGGGATCTGCACAAACATTTTCAGAGCAAAGCTACAAACGTGTTGTTGCTTCTAAGCAAAGTGGCAGCATATGCATTGGCATTAACGGGTTTTTTTTATTGCCAAGCGTCATCAACCTTGAGACCTGAAGACTGTCCAAAATGGCCACCTACAGATGATGCTGTTAAGAGAAGTTTTTCTCCTACCAGAAAAGCTGATAACGATGATGAGGATGCTAATGATTTAGAGAGGAGACCAAGTGACGAGATCAATGTTTCCAATGAAAATGGTTCTGCAAAATCACCCAGGTTGCAAAGGGGGGTGCTCAGGACCAACTGCATAGACTGCCTGGATCGCACAAATGTTGCACAATATGCGTATGGGTTGGCTGCTATTGGCCACCAGCTTCACTCTCTGGGAATTGTTGAGCACCCAAAAGTTGATCTTGATGACCCTGTAGCCAATGATTTGATGCAGTTTTATGAGCGGATGGGTGACACACTTGCACATCAATATGGTGGTTCTGCTGCACACAACAAGATATTCTCTGCGAGGAGAGGTCAATGGAGAGCTGCAACGCAGTCTCAGGAGTTTTTTAGAACTCTTCAACGTTATTACAGCAATGCTTGGATGGATGCTGAGAAACAAGATGCAATCAATGTTTTCCTGGGGCATTTTCAGCCACAGCAGGGTAAGCCTGCTCTATGGGAGTTGGGTTCAGATCAGCACTATGACACAGGGAGACTTGGTGATGATGATGCAAGGTCATTTTTCAAAAGATCGTTTTCAGATGGAAACTTTCTCCGAGATAGCTCTACACCTATGTCAACTCCAAATGCTAAGAATGAAAAAACCCCAAATCCTGGTTTACCAGACCGGTCAGGAGATGGGAGCAAGGCTTTTTGTGAGTCATCACCTGAAATATCTACTCCCGAGCCTGAGTGTGACATTTCATTTTCAAGATACACTCCCTCAATGTCTGGGAGACAGCTTTTTGTGGACATGCAGAAAGAGCGATGTGCTGAGACTCGTCATATTTACTATTCTGAACATGTTGATTCCTTCACCTGCTCCAACTTTGTGGACCTGGATTGGCTATCTTCTTCAGGAAATTCATGTGAAGAAGAGCCATACGAGAGGTCATCTATTACCAGCTCCCCGGTAGCTGAACTATCTTCAGAAAATGTTGTCAATGGAGTGGTAGTTGGAGAAACAGCTGCCTCCACTAGTGATTGGGCCAGCTCCAGCCTAAAGGTACCTCCAGTTATGGGGAGTGAAGCAAGTGAATCAGAGGCATCCTACCGTGATGCACAGACCAACAATCCAGATGAATTTCCTGATACTTTTGTTGAATGGGTGACTTATGGACAGACACTCTGCCATTGA 2541 0.4298 MASSENYERSHSPSLSDETLPPSNLCMQKFRLYETRSNFYMIGRDKSRAYWRVLKIDRLDPSELNVREDSTTYSERECSDLLRRIHEGNKSTGGLKFVTTCYGIVGFIKLLGPYYMLLITKRRQIGAICGHTVYAISKTEMIPLPNSSVRSNITDSKNENRYKKLLCTVDLTKDFFFSYSYHIMRSLQRNMCGAETGHVLYETMFVWNEFLTRGIRNHLQNTFWTVALVYGFFKQDTLEISGREFILTLIARRSRHYAGTRYLRRGVNDKGRVANDVETEQIVFEDVPEGFPIQISSIIQNRGSIPLFWSQETSRLNIKPDIILSKKDQNYQATRLHFENLVKRYGNPIIILNLIKTHEKKPREAILRQEFANAIDFINKDLSEEDRLRFLHWDLHKHFQSKATNVLLLLSKVAAYALALTGFFYCQASSTLRPEDCPKWPPTDDAVKRSFSPTRKADNDDEDANDLERRPSDEINVSNENGSAKSPRLQRGVLRTNCIDCLDRTNVAQYAYGLAAIGHQLHSLGIVEHPKVDLDDPVANDLMQFYERMGDTLAHQYGGSAAHNKIFSARRGQWRAATQSQEFFRTLQRYYSNAWMDAEKQDAINVFLGHFQPQQGKPALWELGSDQHYDTGRLGDDDARSFFKRSFSDGNFLRDSSTPMSTPNAKNEKTPNPGLPDRSGDGSKAFCESSPEISTPEPECDISFSRYTPSMSGRQLFVDMQKERCAETRHIYYSEHVDSFTCSNFVDLDWLSSSGNSCEEEPYERSSITSSPVAELSSENVVNGVVVGETAASTSDWASSSLKVPPVMGSEASESEASYRDAQTNNPDEFPDTFVEWVTYGQTLCH 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00845 846 Pfam SacI homology domain 102 399 IPR002013 GO:0016791
Vivi1g00845 846 MobiDBLite consensus disorder prediction 1 20 - -
Vivi1g00845 846 MobiDBLite consensus disorder prediction 795 830 - -
Vivi1g00845 846 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 17 837 IPR043573 GO:0043813|GO:0046856
Vivi1g00845 846 MobiDBLite consensus disorder prediction 653 669 - -
Vivi1g00845 846 MobiDBLite consensus disorder prediction 438 475 - -
Vivi1g00845 846 MobiDBLite consensus disorder prediction 653 700 - -
Vivi1g00845 846 MobiDBLite consensus disorder prediction 437 487 - -
Vivi1g00845 846 ProSiteProfiles Sac phosphatase domain profile. 166 559 IPR002013 GO:0016791
Vivi1g00845 846 MobiDBLite consensus disorder prediction 816 830 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00845 Vivi-Chr1 18138199 18148976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00845 27 846 Acyl Lipid Metabolism Gene Families AT3G43220 61.436 0.0 997
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00845 K22913 - gmx:100810079 1412.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00845 1 18138199 18148976 Vivi3g01547 3 25475092 25484299 ECH
Vivi1g00845 1 18138199 18148976 Vivi1g00845 1 18138199 18148976 ECH