Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00843 ATGGGAAGAGAACCAGCAGCAAAGCCGCAACAACCAGGGCAAGAAACCGAATACACCGTCGATCAGCTCGTTGCATTCAATCGTTACAATCCCGATATTTTTCCAGATCTCGAAAACTCTGTCAATGAACAGGTTTCGTCTCAGACTTACAGCCTCGAATCAAATCTATGCCTTCTTCGCCTCTACCAGTTTGAACCTGAGAAATTGAGTTCCCAGATTGTAACTCGCATGCTGGTTAAGGCCCTCATGGCTATGCCGGGTCCAGACTTCAGTCTATGTCTCTTTTTGATTCCGGAACGTGTGCAAATGGAGGACCAGTTCAAGACACTGATTGTTCTGTCTCACTATTTGGAGACTGGAAGATTTCGTCAGTTCTGGGACGAAGCAGCCAAAAACCGTCATATACTTGATACTGTGCCAGGATTTGAGCAGGCAATCCAAGGGTATGCAGTTCATGTCCTATCACTGACTTACCAAAAGGTTCCTAGAACTGTGCTTGCTGAGGCTATCAACATAGAAGGTTTAGCTTTGGACAAATTCCTTGAACACCAAGTAGCCAACTCTGGTTGGGTAATTGAGAAAAGTCAGGGCAGGGGTCAACTCATCGTCCTTCCCAGAAATGAATATAATGACCCTATTTTGAAGAAAAACACTGCTGAAAGTGTACCATTGGAGAATATTACTCGCATCTTCCCTATTCTTAGCTGA 708 0.4463 MGREPAAKPQQPGQETEYTVDQLVAFNRYNPDIFPDLENSVNEQVSSQTYSLESNLCLLRLYQFEPEKLSSQIVTRMLVKALMAMPGPDFSLCLFLIPERVQMEDQFKTLIVLSHYLETGRFRQFWDEAAKNRHILDTVPGFEQAIQGYAVHVLSLTYQKVPRTVLAEAINIEGLALDKFLEHQVANSGWVIEKSQGRGQLIVLPRNEYNDPILKKNTAESVPLENITRIFPILS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00843 235 Gene3D - 131 234 IPR036388 -
Vivi1g00843 235 Pfam CSN8/PSMD8/EIF3K family 69 196 IPR033464 -
Vivi1g00843 235 Gene3D ARM repeat; domain 1 13 128 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
Vivi1g00843 235 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 9 232 IPR009374 GO:0003743|GO:0005737|GO:0005852
Vivi1g00843 235 SUPERFAMILY ARM repeat 14 138 IPR016024 -
Vivi1g00843 235 ProSiteProfiles PCI domain profile. 50 209 IPR000717 -
Vivi1g00843 235 SUPERFAMILY "Winged helix" DNA-binding domain 140 232 IPR036390 -
Vivi1g00843 235 FunFam Eukaryotic translation initiation factor 3 subunit K 12 128 - -
Vivi1g00843 235 FunFam Eukaryotic translation initiation factor 3 subunit K 131 234 - -
Vivi1g00843 235 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 11 235 IPR009374 GO:0003743|GO:0005737|GO:0005852
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00843 10 235 Eukaryotic Initiation Factors Gene Family AT4G33250 73.451 3.28e-124 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00843 K15028 - gmx:100306445 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00843 1 18133272 18136096 Vivi1g00843 1 18133272 18136096 ECH