Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00831 ATGGGTCAAGTTAAAACTGGAACGAAATTATTGGCTACACTAACACTAGCACTCCTCCACCTTGTTCCAGTAATTCCAACCTTTTCCGAATCCAACCGCCACCGTGAAACCACCCTGTTGGACAAACACTTAACAGCTGCGGAGGACGGTGCTAGAGTTGTGAGAGTTCGGAAAGACGGAACCGGAGACTTCAGGACGGTGACGGAGGCGGTTAAGAGTATTCCATCAGGGAACAAAAGGCGAGTGGTGGTGTGGATTGGTATGGGAGAATATAGAGAGAAGATAACGGTTGATAAGTCGAAGGGTTTTGTAACGTTTTATGGGGAAAGGAATGGGAACGACAATGACATGCCAATTATTACCTACGACGCAACTGCTTTGCATTATGGGACACTTGATAGTGCAACCGTCGCTGTCGATGCTGATTACTTTGTTGCTGTCAATGTCGCATTTGTGAACTCGTCTCCTATGCCTAATGAAAATAGTGTTGGAGGACAAGCTTTAGCGATGAGGATATCGGGGGATAAGGCTGCATTCTATAATTGCAAGTTCATTGGATATCAGGATACTTTGTGTGATGATAGAGGAAGACATTTTTTCAAGGATTGTTTTATTCAAGGAACCTATGATTTCATCTTTGGAAATGGAAAATCGTTATACTTGAGAACTACGATAGAATCGGTTGCGAAGGGTTTGAATGTTATAACAGCACAAGGTAGGGAAAACATGTCTGAAGACACTGGATTTACGTTTGTGCACTGTAAGGTAACAGGAAGTGGTTACAGAAACACTTACCTCGGACGTGGTTGGAGAAGGAGCGCTAGGGTTGTATTTGCATATACCTATATGAGCTCTGTTGTCAATTCTGTAGGATGGTTTCACCATCATGAATCCAATGAGACAATCTATTTTGGAGAATACAAGTGCACTGGACCAGGTGCTGCTTCCTCTGCAGAAAGGTTAAAATATCAAAGAATACTATCTGACGAAGAAGCAAAACCTTTCTTGAGCTTGGCTTATATTCAAGGAGATGATTGGGTTCGTCCACCTCCCAAGTTGTGA 1062 0.4303 MGQVKTGTKLLATLTLALLHLVPVIPTFSESNRHRETTLLDKHLTAAEDGARVVRVRKDGTGDFRTVTEAVKSIPSGNKRRVVVWIGMGEYREKITVDKSKGFVTFYGERNGNDNDMPIITYDATALHYGTLDSATVAVDADYFVAVNVAFVNSSPMPNENSVGGQALAMRISGDKAAFYNCKFIGYQDTLCDDRGRHFFKDCFIQGTYDFIFGNGKSLYLRTTIESVAKGLNVITAQGRENMSEDTGFTFVHCKVTGSGYRNTYLGRGWRRSARVVFAYTYMSSVVNSVGWFHHHESNETIYFGEYKCTGPGAASSAERLKYQRILSDEEAKPFLSLAYIQGDDWVRPPPKL 353
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00831 353 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 42 348 - -
Vivi1g00831 353 FunFam Pectinesterase 49 349 - -
Vivi1g00831 353 Pfam Pectinesterase 54 344 IPR000070 GO:0030599|GO:0042545
Vivi1g00831 353 SUPERFAMILY Pectin lyase-like 51 349 IPR011050 -
Vivi1g00831 353 Gene3D - 49 350 IPR012334 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vivi1g00831 Vivi-Chr1 17860617 17863392 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00831 40 353 Carbohydrate Esterase AT5G07410 50.633 2.05e-119 347