Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00830 ATGGACGATGCTGGAGTCTCAAAAATAACTGCCAAACTGAAGGAAATATTTCAGAAGTGGCAAACGGGTTCTAAGGAGTGCAACGATGAAAATTCGGGTGCGAATAACGTTGGCATATCGCCGATGATTAACAAGAGGCTAAACAGTTTGATGTACTGTGATTCTGATGAAGATAGCTGCAATAGTCCTAAAGGACCGGATGATGTTCCTAAAGGGTACTTAGCTGTTTATGTTGGCCCGGAGCTTAGGAGGTTTATCATTCCAACAAGTTACCTTAGTCATTCTCTTTTCAAGATGTTGTTGGAAAAAGCTGCTGAGGAATTTGGTTTTAATCAGAGTGGTGGACTTACTATTCCATGTGAAATTGAGACGTTTAAATACCTTCTTAATTGCATGGAGAATACTCAGTTTCAAGATGATGATAACTCATCTGGAAACACATGA 444 0.3964 MDDAGVSKITAKLKEIFQKWQTGSKECNDENSGANNVGISPMINKRLNSLMYCDSDEDSCNSPKGPDDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKMLLEKAAEEFGFNQSGGLTIPCEIETFKYLLNCMENTQFQDDDNSSGNT 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00830 147 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 51 128 IPR003676 GO:0009733
Vivi1g00830 147 Pfam Auxin responsive protein 60 131 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00830 Vivi-Chr1 17852788 17854371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00830 1 143 Calmodulin-binding Proteins AT5G20810 63.226 1.53e-59 181
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00830 1 17852788 17854371 Vivi1g00830 1 17852788 17854371 ECH
Vivi1g00830 1 17852788 17854371 Vivi4g01924 4 89962992 89965379 PCT