Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00829 ATGGACGATGCTGGAGTCTCAAAAATAACTGCCAAACTGAAGGAAATATTTCAGAAGTGGCAAACGGGTTCTAAGGAGTGCAACGATGAAAATTCGGGTGCGAATAACGTTGGCATATCGCCGATGATTAACAAGAGGCTAAACAGTTTGATGTACTGTGATTCTGATGAAGATAGCTGCAATAGTCCTAAAGGACCGGATGATGTTCCTAAAGGGTACTTAGCTGTTTATGTTGGCCCGGAGCTTAGGAGGTTTATCATTCCAACAAGTTACCTTAGTCATTCTCTTTTCAAGATGTTGTTGGAAAAAGCTGCTGAGGAATTTGGTTTTAATCAGAGTGGTGGACTTACTATTCCATGTGAAATTGAGACGTTTAAATACCTTCTTAATTGCATGGAGAATACTCAGTTTCAAGATGATGATAACTCATCTGGAAACACATGA 444 0.3964 MDDAGVSKITAKLKEIFQKWQTGSKECNDENSGANNVGISPMINKRLNSLMYCDSDEDSCNSPKGPDDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKMLLEKAAEEFGFNQSGGLTIPCEIETFKYLLNCMENTQFQDDDNSSGNT 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00829 147 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 51 128 IPR003676 GO:0009733
Vivi1g00829 147 Pfam Auxin responsive protein 60 131 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00829 Vivi-Chr1 17852489 17854370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00829 1 143 Calmodulin-binding Proteins AT5G20810 63.226 1.53e-59 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00829 K14488 - psat:127138712 280.026