Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00823 ATGAAAATACATATCTCCAATACAGTTCTTGTTAATTTCTTGCTCTTGTTCATTTCTCCTCAGTTTCTTTCATTCTCAACCGCCGCAACCGCACCGCAAGATCTTCTCCGTTCATCATGTGCACAAGCAAGATACCCAGCTCTCTGCGTCCAAACACTCTCCAACCAAGTCAGTCCCACAGCCAAGCCCTTAGACCTGGCTCAGGCCGCCGTTAAAGCCAGCATCGCTCGTACTCTCACCCTTTCCCTTTACCTCAAGAACACTCTAAAGTCAGATCTGGCAGTTGTGTCCAAAACCAAGAACAACCGAAAGAGAGTTGCATTGAGTGACTGTGTTGCTCAGGCTTCCGATTCCGTTATTGAGTTAAACCGGGCGTTGAACGAGTTACGGAAGCTTCGCATGGGAACGTTCGAGTGGCAAATGAGTAACGTTCAGACATGGGCTAGTACTGCTATAACAAACGGTAACGCGTGTATCAACGGTGTGAATAGATGTGATGCAGAAGTGAAGGTGAAGAAAGAGGTGAAACGTAGGGTTACGGAAGTATCCATGTTTACAAGTAACGCTCTCTACTTTATCAATCGTCTCAGTGATAGCAGGAATCCAAAGGCTCGCTCCAATACCAATAACTGA 633 0.4629 MKIHISNTVLVNFLLLFISPQFLSFSTAATAPQDLLRSSCAQARYPALCVQTLSNQVSPTAKPLDLAQAAVKASIARTLTLSLYLKNTLKSDLAVVSKTKNNRKRVALSDCVAQASDSVIELNRALNELRKLRMGTFEWQMSNVQTWASTAITNGNACINGVNRCDAEVKVKKEVKRRVTEVSMFTSNALYFINRLSDSRNPKARSNTNN 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00823 210 CDD PMEI-like_3 38 197 - -
Vivi1g00823 210 NCBIfam pectinesterase inhibitor domain 9 196 IPR006501 GO:0004857
Vivi1g00823 210 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 191 - -
Vivi1g00823 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 197 IPR035513 -
Vivi1g00823 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 198 IPR035513 -
Vivi1g00823 210 Pfam Plant invertase/pectin methylesterase inhibitor 35 190 IPR006501 GO:0004857
Vivi1g00823 210 Coils Coil 112 132 - -
Vivi1g00823 210 SMART PMEI_2 31 192 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00823 Vivi-Chr1 17712775 17713671 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00823 35 210 Carbohydrate Esterase AT3G14310 28.415 2.04e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00823 - - mtr:25494163 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00823 1 17712775 17713671 Vivi1g00823 1 17712775 17713671 ECH