Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00822 ATGAAAATACCTATCTCCATTACTGTCCTTGTTAATTTCTTGCTCTTGTTCATTTCTCCTCAGTTTCTTTCACTCTCAACCGCCGCAACCACACCGCAAGATCTCCTCCGTTCATCATGTGCACAAGCAAGATACCCAGCTCTCTGCTTCCAAACACTCTCTAACCAAGTCACTCCCACAGCGAAGCCCTTAGACCTGGCTCAGGCCGCCGTTAAAGCCAGTCTCACTCGCACTCTCACCCTTTCCGTTTACTTCAAGAACACTCTAAACTCAAAGCTGCCTGTTGGGTCAAAAAACAAAAGCAGAAAGCGAGTTGCATTGAGTGACTGTGTTGCTCAGGCTTCCGATTCCGTTATTGAGTTAAACCGAACGTCGAACGAGTTAAGGAAGCTTCACATGGGAACGTTCGAGTGGCAAATGAGTAACGCTCAGACATGGACTAGTACTGCTTTATCCAACGGTAACGCGTGTATTAACGGTGTCAATAGGAGTGATGCAGAAGAGAAGGTGAAGGTGGAGGTGAAACGTAGGGTTACGGAAGTATCCATGTTTACGAGTAACGCTCTCTATTTAATCAGTCGTCTTGGTGATAGCAGGAAACCAAAGCCTCACTCCAATTCCAATAACTGA 630 0.4619 MKIPISITVLVNFLLLFISPQFLSLSTAATTPQDLLRSSCAQARYPALCFQTLSNQVTPTAKPLDLAQAAVKASLTRTLTLSVYFKNTLNSKLPVGSKNKSRKRVALSDCVAQASDSVIELNRTSNELRKLHMGTFEWQMSNAQTWTSTALSNGNACINGVNRSDAEEKVKVEVKRRVTEVSMFTSNALYLISRLGDSRKPKPHSNSNN 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00822 209 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 196 IPR035513 -
Vivi1g00822 209 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 195 IPR035513 -
Vivi1g00822 209 SMART PMEI_2 31 191 IPR006501 GO:0004857
Vivi1g00822 209 Pfam Plant invertase/pectin methylesterase inhibitor 35 190 IPR006501 GO:0004857
Vivi1g00822 209 NCBIfam pectinesterase inhibitor domain 9 194 IPR006501 GO:0004857
Vivi1g00822 209 CDD PMEI-like_3 38 195 - -
Vivi1g00822 209 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00822 Vivi-Chr1 17706603 17707622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00822 35 198 Carbohydrate Esterase AT3G14310 27.381 7.04e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00822 - - mtr:25494163 277.33