Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00805 ATGGCAATTTCAGGATCAGAATCACAGTCACAAACTCAAACTTCTACTGTAAAAACCATTAATCACGTAGAAGTTGAGTGCGTGAAATGCGACTCATGCGGTTTCACAGAAGAATGCACACCAGCATACATCACAAAAGTTCGTCAGAGATATCAAGGCAGATGGCTCTGTGGACTCTGCGTCGAAGCTGTTAAAGACGAAGTTGTTAGATCGGATAGACTCATCACCACTGAAGAAGCACTCAATAGACATATCAGTTTCTGTAAAGAGTTTAGATCGTCGTCAACTAAAACGGTTACGGAGCATCCTATCTTTGTTATGAGCCGAATTCTTCGCAGGAGTTTGGATTCTCCTCGTCGGAAACCGCCTCTTCGGTCGAATTCTACTGGAGTTCTTCCGCCTGTTGATGGTGTTCGTTCTTCGGCGTTGATTCGATCGGAGAGCTGCTTTTCGTCGATATCTGGTTAA 468 0.4423 MAISGSESQSQTQTSTVKTINHVEVECVKCDSCGFTEECTPAYITKVRQRYQGRWLCGLCVEAVKDEVVRSDRLITTEEALNRHISFCKEFRSSSTKTVTEHPIFVMSRILRRSLDSPRRKPPLRSNSTGVLPPVDGVRSSALIRSESCFSSISG 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00805 155 Pfam Protein of unknown function (DUF1677) 25 113 IPR012876 -
Vivi1g00805 155 PANTHER OS01G0745000 PROTEIN 12 154 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00805 Vivi-Chr1 17335836 17336576 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00805 - - gmx:100800301 233.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00805 1 17335836 17336576 Vivi3g01549 3 25497418 25498292 ECH
Vivi1g00805 1 17335836 17336576 Vivi1g00805 1 17335836 17336576 ECH