Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00760 ATGTTTTTGCAGTCTGCACCAGTGAACATTATTGTTGGTTCTCATGTCTGGGTTGAAGATCCAGCACTAGCATGGATTGGTGGTGAAGTTACTAAAATCAGTGGTGAAAACGTCCATGTTCGCACCGGAGATGGGAAAACAGTTGTCAAAAGTATCTCAAAGGTTATTCCCAAGGATAATGAAGCCCCACCTGGTGGTGTAGATGACATGACAAAATTGTCATACTTGCATGAACCAGGAGTTCTGAATAACTTGGCAACTAGATACGAACTTAATGAAATCTATACATATACTGGAAATATCCTGATTGCGATAAACCCATTTCAAAGGTTACCACATCTATATGATACTCACATGATGGAACAATACAAAGGAGCTGCATTTGGAGAGTTGAGTCCCCATGTTTTTGCAGTTGCAGATGTTGCATACAGGGCAATGATTGTTGAGGGAAAAAGCAATTCAATCCTGGTTAGTGGTGAAAGCGGGGCTGGTAAGACAGAGACAACAAAAATGCTTATGCGATATCTTGCTTACCTTGGGGGCCGATCTGGAGTAGAAGGGCGGACAGTTGAACAACAAGTTTTAGAATCTAATCCTGTTCTTGAAGCATTTGGCAATGCCAAAACAGTGAGAAACAATAATTCAAGTCGTTTTGGTAAATTTGTTGAGATACAATTTGACAACAAAGGAAGAATTTCCGGGGCAGCTATACGAACTTATCTACTTGAGAGGTCCCGTGTTTGTCAAGTTTCAGATCCTGAAAGAAATTACCATTGTTTTTACCTTCTTTGTGCAGCACCAGCTGAGGAAAAAGAAAAGTATAAACTGGGAAGTGCTAGCTCCTTCCATTACCTAAACCAATCCAACTGCTATGGGCTTGATGGAGTGGACGATGCAGAAGAATATCTTGCAACTCGAAGGGCAATGGATATTGTTGGAATCAGTGAGGAAGAGCAGGATGCAATTTTTAGGGTTGTAGCCGCAGTTTTGCATCTTGGAAATATTGAATTTGCAAAAGGAGAGGAGATTGATTCTTCTGTCCTTAAGGATGAGAAGTCTAGGTTCCATCTTAATACAACTGCTGAACTTCTCAAGTGTGATGCTAAGAGCTTGGAAGATGCATTGATTCAGCGTGTCATGGTAACTCCTGAGGAGGTTATTACAAGAACACTTGATCCTGTTGCAGCTCTCGGTAGCAGGGATGCATTAGCTAAAACTATCTATTGTCGTTTGTTTGACTGGTTAGTGGAGAAGATTAACAATTCAATTGGACAAGATCCTAATTCAAAATCTATCATTGGAGTTCTCGATATCTATGGGTTTGAAAGTTTTAAGTTTAATAGTTTTGAGCAGTTCTGTATTAATTTTACAAATGAGAAGCTACAGCAACATTTTAATCAGCATGTCTTTAAAATGGAACAAGAAGAATACACCAAAGAAGAAATCGATTGGAGTTACATAGAGTTTGTTGACAACCAAGATGTTTTGGATCTAATTGAGAAGAAACCTGGAGGAATAATTTCACTTCTTGATGAAGCCTGTATGTTTCCTAAGTCTACACATGAAACATTCGCTCAGAAGTTGTACCAGACATTCAAAAACAACAAGCGCTTTATCAAACCGAAACTTTCTCGAACTAATTTCACAATATCTCATTATGCCGGGGAGGTGACATATCAGGCTGATATGTTTCTGGATAAAAACAAGGATTATGTGGTGGCAGAACATCAGGATCTGATGATAGCCTCAAAATGCTCTTTTGTGGCAGGTCTATTCCCCCGCTCTCCAGAAGAATCTTCAAAATCATCAAAATTTTCTTCAATAGGATCTCGCTTTAAGTCACAACTTCAGTCTTTGATGGAGACCCTAAGTTCAACAGAGCCTCACTATATTAGATGCGTGAAGCCAAATAATGTTCTCAAGCCTGCTATTTTTGAAAATCTCAATATTATCCAACAGTTGCGCTGTGGTGGTGTTCTAGAGGCAATTAGAATCAGCTGTGCTGGATATCCTACAAGACGAACTTTTTATGAATTTCTCAACCGTTTTGGTGTTCTTGCCCCTGAAGTTTTGGATGGAAACCACGATGACCAGGTTGCATGTCAAATGATCCTGGGTAAAATGGGTATGAAAGGCTATCAGATAGGCAAGACAAAGGTTTTCCTAAGAGCAGGTCAGATGGCTGAATTGGATGCAAGAAGATCCGAAGTCCTTGGAAATGCAGCTAGAGTCATTCAGAGGCAAACACGTACCCATATTGCACGCAAGGAATTCATTGGATTACGTCGTGCTGCAATTAGTTTGCAATCTAATTTGCGAGGAATATTGGCCCGGAAGCTTTACGAGCAATTGCGACGTGAAGCAGCAGCTCTGAAAATAGAAAAGAACTTCAAAGGATACATTGCCAGGAAATCTTACTTTAAAGTACGATCATCTGCAATCATATTGCAGACTGGATTAAGGGCTATGAAGGCTCGTGATGAATTTAGATTTAGAAAGCAAACAAAGGCTGCAATTCAAATCCAGGCTCATTTTCGCCGGCAAGTTGCATATTCATATTATAAAAAATTGCAAAAGGCTGCGGTTGTTACTCAGTGTGGTTGGAGGAGCAGGGTTGCTAGAAAGGAACTTAGAATGCTTAAAATGGCTGCAAGAGATACAGGGGCTCTTAAAGAAGCCAAAGACAAGCTAGAAAAGCGTGTTGAAGAACTCACATGGCGTTTGCAAATTGAAAAGCGTTTGAGAACTGATTTGGAAGAGGAAAAAGCACAAGAGGTTACCAAGTTGCATGATGCTTTAAATACAATGCAACTACAAGTTGAAGAAGCAAATGCCAGGGTCATCAAAGAGCGTGAAGCTGCACAGAAAGCAATTAAAGAAGCACCTCCAGTTATTAAAGAGACTCCCGTTATAATTCAAGATACTGAGAAGATTAATTCTTTATTGGCTGAAATCAATAGTTTAAAGGATTCACTGCAATTGGAAAAAGAAGGTAAAGAAGAGGCCAAAAAAGCTCAGGCGGAGGCTGAAGCTAGAAATAAGGAGCTGATTAAAAAAGTTGAGGACTCCGATCGCAAAGTGGATCAACTCCAAGAATTGGTTCAGAGATTGGAAGAAAAAATTGCCAATTCCGAGTCAGAAAATCAAGTTCTTCGCCAACAAGCATTGGTTGTATCACCAACCGCAAAAGCTCTTACTGCCAGACCTAAGACAGTGATTATTCAGAGGACACCAGAAAATGGGAATACTCTAAATGGGGAAGTAAAACTTGGACAAGATATGACTCTTGCTCTATCCAATGTGCGTGAGCCTGAATCTGAAGGAAAACCGCAGAAATCTCTGAATGATAAACAACAAGAAAACCAGGACTTGTTGATCAAGTGCATATCACAAGATTTGGGATTTTCTGGTGGCAAACCTGTTGCTGCATGCGTCATATATAAATGCCTTCTACACTGGAGGTCATTTGAAGTTGAAAGAACAACTGTCTTTGACCGTATCATTCAAACAATAGCTTCAGCTGTTGAGGCTCAGGATAATACAGATGTATTAGCCTATTGGTTGTCTAATACATCTACTTTATTGATGCTGCTACAACGCACCCTCAAAGCAAGTGGAGCTGCTAGCTTAACACCTCAGCGGCGGAGAACAGCATCATCTTCTCTGTTTGGAAGGATGTCTCAAGGGCTAAGGGCATCTCCTCAAAGTGCTGGATTGCCATTTATAAATGGAAGAAGTCTTAGTAGACTTGATGGTTTACGACAAGTAGAAGCAAAATATCCGGCACTTCTGTTTAAGCAACAGCTTACTGCCTTCCTTGAGAAGTTATATGGAATGATACGAGACAACCTGAAAAAGGAGATATCCCCATTACTTGGACTGTGTATACAGGCTCCAAGGACCTCCCGTCAAGGTTTAGTAAAAGGACGCTCACATGCTAATGCGGTTGCTCAACAAGCTTTAATAGCTCACTGGCAAAGTATTGTGAAAAGCTTGAACAACTCGCTAAAGATAATGAAAGCAAACTATGCGCCTCCTTTCTTGGTCCGCAAAGTATTCACTCAAATATTCTCATTCATCGATGTTCAATTATTCAATAGTCTTCTGCTGCGCCGCGAGTGTTGTTCATTCAGCAATGGAGAGTATGTGAAGACAGGTTTGGCTGAATTAGAACAGTGGTGCATCGAGGCAACTGAAGAGTACACTGGCTCGGCGTGGGAGGAACTAAAACATATCAGGCAGGCAGTTGGATTCCTGGTGATACATCAAAAGCCCAAGAAATCCCTTAATGAAATAACTAAGGAGCTTTGTCCTGGTCTCAGTATACAACAACTATATAGAATAAGTACAATGTACTGGGATGACAAATACGGCACTCACAGTGTGTCTACAGATGTTACAACAACCATGAGAGCTATGGTTGCGGAGGACTCTAGTAATGCTGTCAGCACTTCTTTCCTATTAGACGATGACTCGAGTATTCCATTTTCGGTGGATGACATCTCGAAATCCATGCAACAAGTAGAAGTTGCTGACGTGGATCCTCCTCCGTTGATACGTGAGAACTCAGGGTTTGGGTTCTTACTAGCTCGCTCGGAGTAA 4602 0.4079 MFLQSAPVNIIVGSHVWVEDPALAWIGGEVTKISGENVHVRTGDGKTVVKSISKVIPKDNEAPPGGVDDMTKLSYLHEPGVLNNLATRYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAAFGELSPHVFAVADVAYRAMIVEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDNKGRISGAAIRTYLLERSRVCQVSDPERNYHCFYLLCAAPAEEKEKYKLGSASSFHYLNQSNCYGLDGVDDAEEYLATRRAMDIVGISEEEQDAIFRVVAAVLHLGNIEFAKGEEIDSSVLKDEKSRFHLNTTAELLKCDAKSLEDALIQRVMVTPEEVITRTLDPVAALGSRDALAKTIYCRLFDWLVEKINNSIGQDPNSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTNFTISHYAGEVTYQADMFLDKNKDYVVAEHQDLMIASKCSFVAGLFPRSPEESSKSSKFSSIGSRFKSQLQSLMETLSSTEPHYIRCVKPNNVLKPAIFENLNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPEVLDGNHDDQVACQMILGKMGMKGYQIGKTKVFLRAGQMAELDARRSEVLGNAARVIQRQTRTHIARKEFIGLRRAAISLQSNLRGILARKLYEQLRREAAALKIEKNFKGYIARKSYFKVRSSAIILQTGLRAMKARDEFRFRKQTKAAIQIQAHFRRQVAYSYYKKLQKAAVVTQCGWRSRVARKELRMLKMAARDTGALKEAKDKLEKRVEELTWRLQIEKRLRTDLEEEKAQEVTKLHDALNTMQLQVEEANARVIKEREAAQKAIKEAPPVIKETPVIIQDTEKINSLLAEINSLKDSLQLEKEGKEEAKKAQAEAEARNKELIKKVEDSDRKVDQLQELVQRLEEKIANSESENQVLRQQALVVSPTAKALTARPKTVIIQRTPENGNTLNGEVKLGQDMTLALSNVREPESEGKPQKSLNDKQQENQDLLIKCISQDLGFSGGKPVAACVIYKCLLHWRSFEVERTTVFDRIIQTIASAVEAQDNTDVLAYWLSNTSTLLMLLQRTLKASGAASLTPQRRRTASSSLFGRMSQGLRASPQSAGLPFINGRSLSRLDGLRQVEAKYPALLFKQQLTAFLEKLYGMIRDNLKKEISPLLGLCIQAPRTSRQGLVKGRSHANAVAQQALIAHWQSIVKSLNNSLKIMKANYAPPFLVRKVFTQIFSFIDVQLFNSLLLRRECCSFSNGEYVKTGLAELEQWCIEATEEYTGSAWEELKHIRQAVGFLVIHQKPKKSLNEITKELCPGLSIQQLYRISTMYWDDKYGTHSVSTDVTTTMRAMVAEDSSNAVSTSFLLDDDSSIPFSVDDISKSMQQVEVADVDPPPLIRENSGFGFLLARSE 1533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00760 1533 Gene3D - 670 736 - -
Vivi1g00760 1533 Pfam IQ calmodulin-binding motif 762 781 IPR000048 GO:0005515
Vivi1g00760 1533 Pfam IQ calmodulin-binding motif 740 758 IPR000048 GO:0005515
Vivi1g00760 1533 Pfam IQ calmodulin-binding motif 859 878 IPR000048 GO:0005515
Vivi1g00760 1533 Pfam IQ calmodulin-binding motif 835 855 IPR000048 GO:0005515
Vivi1g00760 1533 FunFam Class V myosin 442 584 - -
Vivi1g00760 1533 SMART MYSc_2a 59 736 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g00760 1533 Gene3D - 255 313 - -
Vivi1g00760 1533 Coils Coil 887 921 - -
Vivi1g00760 1533 PANTHER MYOSIN 61 1464 - -
Vivi1g00760 1533 SMART iq_5 737 759 IPR000048 GO:0005515
Vivi1g00760 1533 SMART iq_5 760 782 IPR000048 GO:0005515
Vivi1g00760 1533 SMART iq_5 833 855 IPR000048 GO:0005515
Vivi1g00760 1533 SMART iq_5 785 807 IPR000048 GO:0005515
Vivi1g00760 1533 SMART iq_5 856 878 IPR000048 GO:0005515
Vivi1g00760 1533 SMART iq_5 808 830 IPR000048 GO:0005515
Vivi1g00760 1533 Coils Coil 926 960 - -
Vivi1g00760 1533 Gene3D Myosin VI head, motor domain, U50 subdomain 315 604 - -
Vivi1g00760 1533 FunFam unconventional myosin-Va 740 788 - -
Vivi1g00760 1533 CDD MyosinXI_CBD 1116 1499 IPR037975 GO:0007015
Vivi1g00760 1533 ProSiteProfiles Dilute domain profile. 1165 1476 IPR002710 -
Vivi1g00760 1533 Gene3D - 442 626 - -
Vivi1g00760 1533 SMART DIL_2 1351 1458 IPR002710 -
Vivi1g00760 1533 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 788 885 IPR027417 -
Vivi1g00760 1533 Pfam Myosin head (motor domain) 67 723 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g00760 1533 PRINTS Myosin heavy chain signature 95 114 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g00760 1533 PRINTS Myosin heavy chain signature 432 460 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g00760 1533 PRINTS Myosin heavy chain signature 199 226 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g00760 1533 PRINTS Myosin heavy chain signature 485 513 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g00760 1533 PRINTS Myosin heavy chain signature 152 177 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g00760 1533 FunFam unconventional myosin-Va 836 884 - -
Vivi1g00760 1533 Gene3D Kinesin motor domain 68 665 IPR036961 -
Vivi1g00760 1533 ProSiteProfiles IQ motif profile. 857 886 IPR000048 GO:0005515
Vivi1g00760 1533 FunFam Myosin heavy chain 255 310 - -
Vivi1g00760 1533 ProSiteProfiles Myosin motor domain profile. 65 735 IPR001609 GO:0003774|GO:0005524|GO:0016459
Vivi1g00760 1533 Coils Coil 982 1054 - -
Vivi1g00760 1533 ProSiteProfiles IQ motif profile. 740 767 IPR000048 GO:0005515
Vivi1g00760 1533 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 788 IPR027417 -
Vivi1g00760 1533 Pfam Myosin N-terminal SH3-like domain 12 49 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vivi1g00760 1533 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 11 60 IPR004009 GO:0003774|GO:0005524|GO:0016459
Vivi1g00760 1533 ProSiteProfiles IQ motif profile. 761 790 IPR000048 GO:0005515
Vivi1g00760 1533 CDD MYSc_Myo11 79 723 IPR036018 -
Vivi1g00760 1533 Pfam DIL domain 1352 1455 IPR002710 -
Vivi1g00760 1533 ProSiteProfiles IQ motif profile. 834 860 IPR000048 GO:0005515
Vivi1g00760 1533 ProSiteProfiles IQ motif profile. 786 812 IPR000048 GO:0005515
Vivi1g00760 1533 Gene3D - 836 885 - -
Vivi1g00760 1533 Gene3D - 738 788 - -
Vivi1g00760 1533 Gene3D - 789 835 - -
Vivi1g00760 1533 FunFam Myosin 2 315 430 - -
Vivi1g00760 1533 ProSiteProfiles IQ motif profile. 810 838 IPR000048 GO:0005515
Vivi1g00760 1533 FunFam Myosin XI D 670 733 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00760 Vivi-Chr1 16271397 16284219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00760 70 1533 Myosins gene family AT5G20490 82.036 0.0 2508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00760 K10357 - gmx:100777802 2769.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00760 1 16271397 16284219 Vivi1g00760 1 16271397 16284219 ECH