Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00752 ATGAACAGAGGAAATTTAGGTCTTGGTCTTAAACTCTCTGTTCCTGCAACTGATCAAGTTGCTTTTGCTAAGTTTCTGACTGAGAGTGGAACGTTTAAGGATGGAGATCTGCTTGTTAACAGAGATGGAGTTCGGATTGTCTCTCAGTCTGAAGTTGAAGCTCCACCACCAATCAAGGCAACAGACAACCAGTTAAGTTTGGCGGACATCGACATAGTGAAAGTTGTTGGGAAGGGAAATGGAGGGGTGGTGCAATTGGTGCAACACAAATGGACCAATCAGTTTTTCGCATTAAAGACAATTCAAATGAATATTGAAGAGTCCGTGCGCAAGCAGATAGCTAAAGAGCTGAAAATTAATCAAGCAGCACAATGTCCTTATGTTGTTGTCTGCTACCAATCATTCTATGATAATGGTGTCATATCAATCATCTTAGAGTACATGGATGGAGGTTCCTTGGCTGATCTTCTGAAGAAAGTTAAAACAATTCCAGAGCCTCGTCTTTCTGCCATATGTAAGCAGGTTCTAAAGGGTTTGGCATATCTTCACCATGAAAGACATATTATCCACAGAGACTTGAAGCCTTCTAATTTGTTGATAAACCATACTGGCGAAGTAAAGATTACTGATTTTGGTGTTAGTGCAATTATGGAAAGTACATCTGGTCAAGCAAATACTTTCATTGGCACGTACAACTATATGTCTCCAGAGAGAATCAATGGAGGCCAGGGTGGCTACAACTACAAAAGTGATATATGGAGTTTGGGACTAATATTGCTTGAGTGTGCTATGGGGCGGTTTCCATATATGCCACCAGATCAAAGTGAAAGATGGGAAAGTATATTTGAGCTTATTGAAACTATTGTCGACAAGCCTCCTCCTAGTGCTCCATCTGAACAATTTTCTCCAGAATTTTGCTCATTTATCTCTGCATGTCTACAGAAAGATCCGAGGAATAGACTGTCGGCTCAGGAACTTTTGGAACTTCCTTTTATCAGCATGTATGATGATCAGCATGTAGATCTCTCAGCTTACTTCTCCAAAGCAGGATCTCCACTCGCAACCTTGTAA 1071 0.408 MNRGNLGLGLKLSVPATDQVAFAKFLTESGTFKDGDLLVNRDGVRIVSQSEVEAPPPIKATDNQLSLADIDIVKVVGKGNGGVVQLVQHKWTNQFFALKTIQMNIEESVRKQIAKELKINQAAQCPYVVVCYQSFYDNGVISIILEYMDGGSLADLLKKVKTIPEPRLSAICKQVLKGLAYLHHERHIIHRDLKPSNLLINHTGEVKITDFGVSAIMESTSGQANTFIGTYNYMSPERINGGQGGYNYKSDIWSLGLILLECAMGRFPYMPPDQSERWESIFELIETIVDKPPPSAPSEQFSPEFCSFISACLQKDPRNRLSAQELLELPFISMYDDQHVDLSAYFSKAGSPLATL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00752 356 Pfam Protein kinase domain 73 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g00752 356 SUPERFAMILY Protein kinase-like (PK-like) 64 340 IPR011009 -
Vivi1g00752 356 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Vivi1g00752 356 ProSiteProfiles Protein kinase domain profile. 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g00752 356 FunFam Mitogen-activated protein kinase kinase 6 151 351 - -
Vivi1g00752 356 CDD PKc_MAPKK_plant_like 85 336 - -
Vivi1g00752 356 Gene3D Transferase(Phosphotransferase) domain 1 150 352 - -
Vivi1g00752 356 FunFam Mitogen-activated protein kinase kinase 6 40 149 - -
Vivi1g00752 356 Gene3D Phosphorylase Kinase; domain 1 44 149 - -
Vivi1g00752 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Vivi1g00752 356 SMART serkin_6 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g00752 356 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 17 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00752 Vivi-Chr1 16192259 16197000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00752 1 327 MAP Kinase Kinase Gene Family AT4G29810 66.964 2.71e-169 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Vivi1g00752 Pkinase 2.3e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00752 K20603 - gmx:100789734 630.557