Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00749 ATGGAGATAACCGGGTTAAAGCTTATGGCGAATACTGCGGCGGCTTTGATGTTAAATCCTGGAGCTGGAAATGAAAACCGTGCTGATGTTGGTCTTCAACATCAGATTATGGTATCTGCGGAGGTAAAGGAGAATCAAGTTGGGGCAGCTGTTGTTTCGGAAATGGTGATTGAATGCGAGAGTAATTGGGTTTTGAGTGAAAGGGGTAAACAGACAAATAAGGAAGATGAAATAATGTTAGCTGTGGATTTTCAGTGTTCGCGTAATTTGGGCTCTCGATCTGGGGCCGATTCGCCATTAATTGTGACGGTTGGTGATGATATTCATGGTAAGTTTAGTAGTATAAATGAGGTGCTTCCGGGGCTAAAGCCAGAGCAGGACACGGTTTCTATTGCAATGGATGTTGAGAGTGAAAATCGTTGTGCATCAGAAGAGGCTGATCCAAAACTATCTGCTATGATTCTTGATCAGTTCCCTGAGGAGAACAAAACATTGAGAACAAGCAACCGGAATGGGTTAGAATTGAGTAATGGTCCTCTTTGGGGTTCCTCGTCAATCTGTGGAAATAGACCGGAGATGGAAGATGCTGTTGCTGTTAAACCTCAACTTTTTCAAGTCCCTCCGCGGATGCTTATGGATGATGAACGTGTAAATGAAAACTCAAAATACTCACCAGCCCATTTTTTCAGTGTCTATGATGGACATGGGGGCTTTCAGGTTGCTAATTACTGCCGGGAACGTCTTCATTCAGCGTTGATTGAGGAGATTGAAGCTCGACAATCGAGATTGGCCGGAACAAATGAGAGAAATGATTGGCGGGGAGATTGGAAGAAAGTATTCTTCGACTGTTTTCAGAAAGTAGATGACGAGGTTGGAGGAATTGGTGCAGGTAGTAGCGGAAATAACGGCGAGGGATCTGAGTCTAACATTGAACCTATTGCTCCTGAGACTGCTGGTTCCACTGCAGTGGTTGCCATTTTAAGTCAAACCCACATAATAATTGCAAACTGCGGGGATTCAAGAGCTGTCTTGTATCGCGGAAAAGAAGCTGTGGCGTTGTCTGCTGACCACAAACCGAATCGGGAGGATGAGAGAGCAAGAATAGAAGCTGCAGGAGGAAGAGTCATTCATTGGAAAGGATACCGAGTTCTTGGTGTCTTGGCGATGTCAAGGTCCATAGGTGATAGATACTTGAAACCATGGATAATTCCAGAGCCAGAAGTTAATATTATGCAGAGAGAGAAAAATGATGAGTGTCTAATTATAGCAAGTGATGGTTTATGGGATGTAATAACAAATGAAGAAGCCTGTGAAGTTGCAAGGAAGAGAATCCTTCTTTGGCACAAGAAATTTGGCGACAACGGAACAACAGTATATGACAAAGGAGAAGGAGGAGTTGATCTTGCATCTCAGTCTGCTGCAGAGTATCTGTCTAAACTCGCCCTCCACAGAGGAAGCGGCGATAACATCTCTGTAATTGTGATAGATTTAAAGGCTGTGAGAAAATTGAAGAGAAAGACATAA 1524 0.4357 MEITGLKLMANTAAALMLNPGAGNENRADVGLQHQIMVSAEVKENQVGAAVVSEMVIECESNWVLSERGKQTNKEDEIMLAVDFQCSRNLGSRSGADSPLIVTVGDDIHGKFSSINEVLPGLKPEQDTVSIAMDVESENRCASEEADPKLSAMILDQFPEENKTLRTSNRNGLELSNGPLWGSSSICGNRPEMEDAVAVKPQLFQVPPRMLMDDERVNENSKYSPAHFFSVYDGHGGFQVANYCRERLHSALIEEIEARQSRLAGTNERNDWRGDWKKVFFDCFQKVDDEVGGIGAGSSGNNGEGSESNIEPIAPETAGSTAVVAILSQTHIIIANCGDSRAVLYRGKEAVALSADHKPNREDERARIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNIMQREKNDECLIIASDGLWDVITNEEACEVARKRILLWHKKFGDNGTTVYDKGEGGVDLASQSAAEYLSKLALHRGSGDNISVIVIDLKAVRKLKRKT 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00749 507 Pfam Protein phosphatase 2C 187 490 IPR001932 -
Vivi1g00749 507 ProSiteProfiles PPM-type phosphatase domain profile. 180 497 IPR001932 -
Vivi1g00749 507 SMART PP2C_4 170 495 IPR001932 -
Vivi1g00749 507 PANTHER PROTEIN PHOSPHATASE 149 497 IPR015655 GO:0004722|GO:0006470
Vivi1g00749 507 FunFam Protein phosphatase 2C 16 168 507 - -
Vivi1g00749 507 SUPERFAMILY PP2C-like 178 498 IPR036457 -
Vivi1g00749 507 Gene3D - 168 507 IPR036457 -
Vivi1g00749 507 ProSitePatterns PPM-type phosphatase domain signature. 228 236 IPR000222 GO:0043169
Vivi1g00749 507 CDD PP2Cc 182 497 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00749 Vivi-Chr1 16189164 16192102 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00749 154 507 PP2C-type Phosphatase Gene Family AT1G17550 55.493 5.82e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00749 K14497 - gmx:100789207 669.848