Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00747 ATGGAGGAAATATCTTCGAGTGTTGCAGTACCGTTTACGCTTGGAAATTTGATTCAGAAAGATGCTGCGGTTACGACTCGTATGGAGATAACCGGGTTAAAGCTTATGGCGAATACTGCGGCGGCTTTGATGTTAAATCCTGGAGCTGGAAATGAAAACCGTGCTGATGTTGGTCTTCAACATCAGATTATGGTATCTGCGGAGGTAAAGGAGAATCAAGTTGGGGCAGCTGTTGTTTCGGAAATGGTGATTGAATGCGAGAGTAATTGGGTTTTGAGTGAAAGGGGTAAACAGACAAATAAGGAAGATGAAATAATGTTAGCTGTGGATTTTCAGTGTTCGCGTAATTTGGGCTCTCGATCTGGGGCCGATTCGCCATTAATTGTGACGGTTGGTGATGATATTCATGGTAAGTTTAGTAGTATAAATGAGGTGCTTCCGGGGCTAAAGCCAGAGCAGGACACGGTTTCTATTGCAATGGATGTTGAGAGTGAAAATCGTTGTGCATCAGAAGAGGCTGATCCAAAACTATCTGCTATGATTCTTGATCAGTTCCCTGAGGAGAACAAAACATTGAGAACAAGCAACCGGAATGGGTTAGAATTGAGTAATGGTCCTCTTTGGGGTTCCTCGTCAATCTGTGGAAATAGACCGGAGATGGAAGATGCTGTTGCTGTTAAACCTCAACTTTTTCAAGTCCCTCCGCGGATGCTTATGGATGATGAACGTGTAAATGAAAACTCAAAATACTCACCAGCCCATTTTTTCAGTGTCTATGATGGACATGGGGGCTTTCAGGTTGCTAATTACTGCCGGGAACGTCTTCATTCAGCGTTGATTGAGGAGATTGAAGCTCGACAATCGAGATTGGCCGGAACAAATGAGAGAAATGATTGGCGGGGAGATTGGAAGAAAGTATTCTTCGACTGTTTTCAGAAAGTAGATGACGAGGTTGGAGGAATTGGTGCAGGTAGTAGCGGAAATAACGGCGAGGGATCTGAGTCTAACATTGAACCTATTGCTCCTGAGACTGCTGGTTCCACTGCAGTGGTTGCCATTTTAAGTCAAACCCACATAATAATTGCAAACTGCGGGGATTCAAGAGCTGTCTTGTATCGCGGAAAAGAAGCTGTGGCGTTGTCTGCTGACCACAAACCGAATCGGGAGGATGAGAGAGCAAGAATAGAAGCTGCAGGAGGAAGAGTCATTCATTGGAAAGGATACCGAGTTCTTGGTGTCTTGGCGATGTCAAGGTCCATAGGTGATAGATACTTGAAACCATGGATAATTCCAGAGCCAGAAGTTAATATTATGCAGAGAGAGAAAAATGATGAGTGTCTAATTATAGCAAGTGATGGTTTATGGGATGTAATAACAAATGAAGAAGCCTGTGAAGTTGCAAGGAAGAGAATCCTTCTTTGGCACAAGAAATTTGGCGACAACGGAACAACAGTATATGACAAAGGAGAAGGAGGAGTTGATCTTGCATCTCAGTCTGCTGCAGAGTATCTGTCTAAACTCGCCCTCCACAGAGGAAGCGGCGATAACATCTCTGTAATTGTGATAGATTTAAAGGCTGTGAGAAAATTGAAGAGAAAGACATAA 1605 0.4355 MEEISSSVAVPFTLGNLIQKDAAVTTRMEITGLKLMANTAAALMLNPGAGNENRADVGLQHQIMVSAEVKENQVGAAVVSEMVIECESNWVLSERGKQTNKEDEIMLAVDFQCSRNLGSRSGADSPLIVTVGDDIHGKFSSINEVLPGLKPEQDTVSIAMDVESENRCASEEADPKLSAMILDQFPEENKTLRTSNRNGLELSNGPLWGSSSICGNRPEMEDAVAVKPQLFQVPPRMLMDDERVNENSKYSPAHFFSVYDGHGGFQVANYCRERLHSALIEEIEARQSRLAGTNERNDWRGDWKKVFFDCFQKVDDEVGGIGAGSSGNNGEGSESNIEPIAPETAGSTAVVAILSQTHIIIANCGDSRAVLYRGKEAVALSADHKPNREDERARIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNIMQREKNDECLIIASDGLWDVITNEEACEVARKRILLWHKKFGDNGTTVYDKGEGGVDLASQSAAEYLSKLALHRGSGDNISVIVIDLKAVRKLKRKT 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00747 534 Gene3D - 195 534 IPR036457 -
Vivi1g00747 534 SUPERFAMILY PP2C-like 205 525 IPR036457 -
Vivi1g00747 534 Pfam Protein phosphatase 2C 214 517 IPR001932 -
Vivi1g00747 534 ProSiteProfiles PPM-type phosphatase domain profile. 207 524 IPR001932 -
Vivi1g00747 534 PANTHER PROTEIN PHOSPHATASE 176 524 IPR015655 GO:0004722|GO:0006470
Vivi1g00747 534 CDD PP2Cc 209 524 IPR001932 -
Vivi1g00747 534 ProSitePatterns PPM-type phosphatase domain signature. 255 263 IPR000222 GO:0043169
Vivi1g00747 534 SMART PP2C_4 197 522 IPR001932 -
Vivi1g00747 534 FunFam Protein phosphatase 2C 16 195 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00747 Vivi-Chr1 16189157 16192102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00747 181 534 PP2C-type Phosphatase Gene Family AT1G17550 55.493 5.71e-134 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00747 K14497 - gmx:100789207 709.523