Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00696 ATGTTACCTGTTCTTTTGTTCTTTGCTCTGGCACTGATGTTGCAGTTGTTGAAGCTCTGCATCATCATCATAGGCTTTGTAGTGGCAACCCAAGGATCCAGAGGGCCATTATCACCTCCTGCATCAGCTCCAACTCCTCAAAAGAGTAAAGAAACTGAACCATTCATATCTCCAAGTTCAAGCTCTATAGCATTATCACCACAATATGAAGTTGTTCCTTCACCAACAACATTGCAAGGGATTATGCCACCATCTGCAGCTCCTGCAGCACAAAAGGCAAGGCAGTTACATCATGCTCCTCATCCATTGACTTCATTTCATTCTCCTGCATTGGCACCTTCAATCTCAAATTATAAACATCATCATATAAGGAACATAATTACCATTCCTGCTCCTGCATCATCATATACGGTTTCTCCTCCCATTTCAAAACCACGAGATAGAGCAATTCCTCCCTCATTATCACCAACATCTGGTAGAAAAAGACATCATGTTCCTCCTAAAGTATCTCCACCTGGTTCTTCTTCCAAAACACTGCCACACCCACCTCCTAATGAAGATTGTTTATCAACTGTATGCACTGAGCCTTATGTAACTTCTCCTCCCGGAACACCTTGCAGATGTGTCTGGCCTATTCGAGTGGGTCTTCGTCTTAGCGTTTCTCTTTATACCTTCTTCCCTTTGGTCTCGGAGTTGGCTTCCGAGCTTGCAAGTGGGATTTTTATGAAGCAAAGTCAAATTACAATTGTGGGAGCCAATGCAGCAAACCAGCAACCTGATAAAACAGTTGTCCTTATTAATTTGGTGCCACTCGGGGAAAAGTTTGATAACTCAACAGCCTTTTTGACTTCTCATAGGTTTTGGCATAAAAAAGTTGTTCTTAAAGCCTCCTACTTTGGTGACTATGATGTGTTATATCTGAACTATCCAGGTTTACCTCCTTCTCCTCCTTTACCACCATCAAGCATTACAATGATAGATGGTGGTCCTTATACCATTGATGGCAATAATGGAAGGACAATAAAGCCCATTGGAGTTGACATACAGAAGAGACAGAATAGAGGTGATCTTAGCAGAGAATTTATTGCCATCATTGCTATTTCAGTTTTTGTAGCAGTTGTTTTATGCACTGCTGCTGCCTGGTTCATGTTTAAGTTCAAAGTTCCTGTTAGTCATCCGGCATTGACTCCGTGGCTTTCACATCCTTCTCTTACCAAAGCACCAGTTACTGATACTGGATCATTAGTTGGAGATGGAAGGGTTGGTTCTGTTTCTTCGTCATTTGAAACTGGCATGACCGCTTATAAAGTGTCTGTTAAAACTTTCAGTATGAATGACATTGAGAAAGCTACTGATAATTTTGATTCTTCAAGAATACTTGGAGAAGGTGGTTTTGGACTTGTTTACGGCGGTGTCCTTGAAAATGGGACAAAAGTGGCAGTCAAGGTTCTAAAAAAGAGGGAGGATCTTCATAGTAATCATGAATTCTTATCTGAAGTTGAGATGCTTAGTCGTCTTCACCATAGAAATCTGGTGAAGTTGATTGGTATATGTACCGAGGAAGACAGCTTCCACTGCTTGGTTTATGAACTCGTTACAAATGGGAGCTTGGAATCACAATTACATGGAGTTGACAGAGAAAAATGTGCACTTGACTGGCGTGCTAGGATGAAGATAGCTCTCGGTGCAGCTCGTGGTTTAGCTTATCTGCATGAAGATTCAAGTCCATGTGTAATTCATAGGGACTTCAAGTCTAGCAACATATTGTTGGAAGATGATTTTACTCCAAAAGTATCTGATTTTGGATTGGCCCGGACCGCTGTAGACGAGGAAAGTAGACACATATCAACCCGTGTCGTGGGAACATTCGGTTACGTGGCTCCAGAGTACGCAATGAACGGTCATCTTCATGTCAAGAGTGATGTATACAGCTATGGCGTTGTTCTTCTCGAGCTTCTGACCGGAAGAAAACCTATAGACATGTCACAAACTCCTGGCCAAGAGAATCTCGTTGCTTGGTCTCATCAATTTCTCACAAGTAAAGAAGGATTAGAAGCAATAATAGATCCATCTATAGGACTCGACGCGCCTTCTGGTAGCGTGGCCAAAGTAGCAGCCATTGCTTCAATGTGCGTGCAGCCAGAAGCATCGAACCGTCCATTCATGAGTGAAGTTGTTCAGGCTTTAAAACTTGTATGCAATGAATGTGAAGAAGCAAAAGAAGATGATGGTTTAAGAAGTTATAGCCAAGAGCACGAGGATTTATCGGTTGTTGATAATGATATTGAAAATGGTTTGTCAGCATCAGAACTATTCAGTTCTTGTGGTGGAATTGGTAGAATGGAGTATGAAACATATAGAAGAAAATCATATTCAGGTCCTATGGGAAATGGAAGAAGTAAACAATTGTGGGAGATAATGAGAAGGCTTTCTGGTGGTAGTGTTAGTGAACATGGAACTATATGA 2466 0.4152 MLPVLLFFALALMLQLLKLCIIIIGFVVATQGSRGPLSPPASAPTPQKSKETEPFISPSSSSIALSPQYEVVPSPTTLQGIMPPSAAPAAQKARQLHHAPHPLTSFHSPALAPSISNYKHHHIRNIITIPAPASSYTVSPPISKPRDRAIPPSLSPTSGRKRHHVPPKVSPPGSSSKTLPHPPPNEDCLSTVCTEPYVTSPPGTPCRCVWPIRVGLRLSVSLYTFFPLVSELASELASGIFMKQSQITIVGANAANQQPDKTVVLINLVPLGEKFDNSTAFLTSHRFWHKKVVLKASYFGDYDVLYLNYPGLPPSPPLPPSSITMIDGGPYTIDGNNGRTIKPIGVDIQKRQNRGDLSREFIAIIAISVFVAVVLCTAAAWFMFKFKVPVSHPALTPWLSHPSLTKAPVTDTGSLVGDGRVGSVSSSFETGMTAYKVSVKTFSMNDIEKATDNFDSSRILGEGGFGLVYGGVLENGTKVAVKVLKKREDLHSNHEFLSEVEMLSRLHHRNLVKLIGICTEEDSFHCLVYELVTNGSLESQLHGVDREKCALDWRARMKIALGAARGLAYLHEDSSPCVIHRDFKSSNILLEDDFTPKVSDFGLARTAVDEESRHISTRVVGTFGYVAPEYAMNGHLHVKSDVYSYGVVLLELLTGRKPIDMSQTPGQENLVAWSHQFLTSKEGLEAIIDPSIGLDAPSGSVAKVAAIASMCVQPEASNRPFMSEVVQALKLVCNECEEAKEDDGLRSYSQEHEDLSVVDNDIENGLSASELFSSCGGIGRMEYETYRRKSYSGPMGNGRSKQLWEIMRRLSGGSVSEHGTI 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00696 821 MobiDBLite consensus disorder prediction 44 62 - -
Vivi1g00696 821 Gene3D Phosphorylase Kinase; domain 1 426 531 - -
Vivi1g00696 821 Gene3D Transferase(Phosphotransferase) domain 1 532 755 - -
Vivi1g00696 821 ProSitePatterns Protein kinases ATP-binding region signature. 460 482 IPR017441 GO:0005524
Vivi1g00696 821 PANTHER OS01G0750732 PROTEIN 180 753 - -
Vivi1g00696 821 SUPERFAMILY Protein kinase-like (PK-like) 429 729 IPR011009 -
Vivi1g00696 821 Pfam Protein tyrosine and serine/threonine kinase 457 729 IPR001245 GO:0004672|GO:0006468
Vivi1g00696 821 CDD STKc_IRAK 460 730 - -
Vivi1g00696 821 FunFam Receptor-like serine/threonine-protein kinase ALE2 532 747 - -
Vivi1g00696 821 MobiDBLite consensus disorder prediction 136 184 - -
Vivi1g00696 821 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 426 531 - -
Vivi1g00696 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 578 590 IPR008271 GO:0004672|GO:0006468
Vivi1g00696 821 MobiDBLite consensus disorder prediction 33 62 - -
Vivi1g00696 821 ProSiteProfiles Protein kinase domain profile. 454 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00696 Vivi-Chr1 14958293 14962208 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00696 185 820 Receptor kinase-like Gene Family AT5G56890 59.254 0.0 760
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vivi1g00696 PK_Tyr_Ser-Thr 9.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00696 - - psat:127138624 1386.7