Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00564 TGTGACACAAATATGTCATCAACAAAAGTAACATTAAAAAGTTGTTACTCGGTGAGACCTAAAGAACCAACATGGTGTGGTCGATTACCATTATCTGAATGGGATCAAATTGGAATCATAACACATGTGCCAACAATTTACTTTTACCACCCTCCACAAGATTGGCTTACCTCTCCCACTAAAATATCCACCACTTTGAAAGAGTCGTTAAGCAAAGTTCTAGTGCCATTTTATCCATTAGCGGGTCGTTTACAATGGAAAGAAAATGGTCGTTTTGATCTCGAATGCAACTCATTGGGTGTTCAATTCATTGAAGCACAATCTTCGTTAGCATTATCTGAGTTCGATAACTTTTCACCATCTTCTGAATATTATCGTTATCTCATCCCGCACGTTGATTACACGCTTCCAATTCAAGATATTCCTTTGATTTTTGTTCAACTCACAAGTTTCAAATGTGGAGGTATTAGCATTGGGTTGTTAGTCTCACACGCAGTTGCTGATGGACAAAGTGCATTGCATTTTACTTCTGAATGGGCCCGACTTGCACGTGGCGAAACTATAAAAACGATGCCGTTTTTAGACAGGAGTGTTGTGTCTTTAAAATCAGATTATTGTAATTGTGTTAATGAATGGGAGTTTAATCAACCTCCATTATTGCTGGGAAATTTAGATAATGTTGAAGAAAGAAAGCGAAAATCTACGGTGGCTATAATAAAAGTGAGTAAATCACAACTAGAAAAATTGAGAAAAATTGCAAATGAAAGTTGGGAAAACCCTAGTAATGGTCGAGGTTTTACAAGGTATGAAACAGTAACCAGTCATATTTGGAGAAGTGCATGTAAAGCCAGAGGGCATAAAAATAACCAACCAACTACACTTGGTGTTTGTGTTGATTGGAGGAATCGTGTGGAACCTAATTTACCAAAAGGGTATTTTGGGAATGCAACTTTGGATGTTGTGGCAACTAGTCTTGCAGGTGATTTAATGGCTAAGCCTTTAGGATATGCTTCAAGTAGGGTTAGGGAAGCGATTGAAAAAGTGAATGATGAGTATGTGAGACAAGTGAGTGATTATTTTAAGAAACAAGACGATTTGACTAAGTTTCAAGATCTTCATGCAATGATAGGGAATGATGATGAAGGGTTTTTTTATGGGAATCCTAATTTAGGTGTGGTTAGTTGGTTGACATTGCCTATCCATGGACTTGATTTTGGATGGGGAAAAGAGATTTATATGGGACCAGGAACACATGAAATTGATGGAGATACTTTGCTTCTTCCTAGTCATGATGATGATGGATCTTTGTCAGTTGCTATTTGTTTGCAAGAGGTTTATATGGGTGCCTTCAAGAGACATTTTTATGAAGACATTGTGTGA 1380 0.3739 CDTNMSSTKVTLKSCYSVRPKEPTWCGRLPLSEWDQIGIITHVPTIYFYHPPQDWLTSPTKISTTLKESLSKVLVPFYPLAGRLQWKENGRFDLECNSLGVQFIEAQSSLALSEFDNFSPSSEYYRYLIPHVDYTLPIQDIPLIFVQLTSFKCGGISIGLLVSHAVADGQSALHFTSEWARLARGETIKTMPFLDRSVVSLKSDYCNCVNEWEFNQPPLLLGNLDNVEERKRKSTVAIIKVSKSQLEKLRKIANESWENPSNGRGFTRYETVTSHIWRSACKARGHKNNQPTTLGVCVDWRNRVEPNLPKGYFGNATLDVVATSLAGDLMAKPLGYASSRVREAIEKVNDEYVRQVSDYFKKQDDLTKFQDLHAMIGNDDEGFFYGNPNLGVVSWLTLPIHGLDFGWGKEIYMGPGTHEIDGDTLLLPSHDDDGSLSVAICLQEVYMGAFKRHFYEDIV 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00564 459 FunFam Tryptamine hydroxycinnamoyl transferase 223 455 - -
Vivi1g00564 459 Pfam Transferase family 9 456 - -
Vivi1g00564 459 Gene3D - 4 214 IPR023213 -
Vivi1g00564 459 Gene3D - 223 457 IPR023213 -
Vivi1g00564 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00564 Vivi-Chr1 12398336 12399715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00564 9 456 Monolignol Biosynthesis Gene Families AT5G48930 37.029 8.85e-105 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00564 K13065 - gmx:100777007 585.104