Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00495 ATGTCGAAGAAAAGCATTACACTGGGAAATTTTGTCGGTTTGACAGGTGCAATGGTTCGACTTGTGGTTAAGGATCAACAGAAATTGCGGAATATCCTTGGGAGTGGTATGTCAAACAAGATGTGGGAAGCTCTCTTAGAACATGCAAAGACATGTGTTCTAAGTGGGAAGCTTTATGTTTATTATCCAGAGGATACAAGAAATGTTGGTGTTATTTTTAACCACGTCTATGAGCTGCGTGGCCTTATAACAGGAGAGCAATTCTTCTCTGCTGATTCTCTCAATGATAATCAGAAGGTTTACGTAGATTCATTGGTGAAAAAGGCATATGACAATTGGGAGCAGGTTATAGAGTACGATGGTAAATCACTTATAGATGCCGAGCAAAACAACAATTCTGCTGTACCTGAAAATGAACTTCATGTTGAGGCAATTGATTTTGATGGTGGTTTAGACCATCAACTGCAAATGCCATCCCTCCCCATGTCTGTTACTTCTGAACACCAGATTAATTCAGGGATGCCAGTTGGAGGTTATATCAATAATATGGTGACAAGGTATCCAAGCCAGGCATTGATTGGAAATTCCAGCTCTCGGAGTCAGTTCGAAGGCTCATTATATCTGTCTAATGATCAATTAATAAGCAATGATCACCAATCTCTAAGCTCTAGAAATGATCATAGCACCGTTGGGTTGGCTCTTGGTCCTCCTCAATCGACATCAGGTTTCCATGCTGGTAGCTCTTCTATTCAACCATCTGCACCAAATCCTTTTGATGATTGGTCACACAACAGGGACAAGGGCGTTGATGACTTCTTTTCGGAAGATGAAATCCGTGTTAGAAGTAATGAGATACTAGAGAATGAAGACATGCAGCACTTGCTCCGCCTTTTCAGCATGGGTGGTCATGCTTCCATGAATACCGAGGATGGTTATTCCTTCCCATCATTCATGCCATCTCCTATGCCGAACTTCGATGAGGACCGCTCTCGTCCTGGTAGAGCTGTTGTGGGATGGCTGAAGATCAAGGCAGCAATGAGGTGGGGTTTCTTTATCAGAAAGATAGCAGCTGAGAAGCGGGCTCAGATAGAGGAGTTAGACGAGTAG 1107 0.4291 MSKKSITLGNFVGLTGAMVRLVVKDQQKLRNILGSGMSNKMWEALLEHAKTCVLSGKLYVYYPEDTRNVGVIFNHVYELRGLITGEQFFSADSLNDNQKVYVDSLVKKAYDNWEQVIEYDGKSLIDAEQNNNSAVPENELHVEAIDFDGGLDHQLQMPSLPMSVTSEHQINSGMPVGGYINNMVTRYPSQALIGNSSSRSQFEGSLYLSNDQLISNDHQSLSSRNDHSTVGLALGPPQSTSGFHAGSSSIQPSAPNPFDDWSHNRDKGVDDFFSEDEIRVRSNEILENEDMQHLLRLFSMGGHASMNTEDGYSFPSFMPSPMPNFDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIAAEKRAQIEELDE 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00495 368 PANTHER OS02G0177800 PROTEIN 19 291 IPR012416 GO:0005516
Vivi1g00495 368 MobiDBLite consensus disorder prediction 218 258 - -
Vivi1g00495 368 Pfam Calmodulin binding protein central domain 18 52 IPR046830 -
Vivi1g00495 368 Pfam Calmodulin binding protein C-terminal domain 57 119 IPR046829 -
Vivi1g00495 368 MobiDBLite consensus disorder prediction 218 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00495 Vivi-Chr1 10474444 10476729 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00495 18 363 Calmodulin-binding Proteins AT5G57580 56.338 1.18e-129 384