Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00493 ATGCAGAGACCAACTACTGACGGAGTTAATATGGGGAAAAGGACTCTGGAGGGTGGTGAAGATGACCAGCCTGAACGAAAGAGGCCTGCTCTTGCCAGTGTAATTGTTGAAGCTCTCAAGGTGGACAGTTTGCAGAAGCTTTGCTCATCTTTAGAACCTATTCTTCGAAGAGTTGTTAGTGAAGAAGTGGAGCGTGCTTTGGCGAAGCTAGGTCCTGCAAGACTTAATGGAACTGGAAGGTCTTCCCCTAAAAGGATTGAAGGTCCTGATGGTAGAAACTTGCGGCTTCAGTTTAGGTCCCGACTGGCTCTTCCTTTATTCACAGGAGGAAAAGTTGAAGGCGAGCAGGGAGCTCCAATTCATGTTGTTCTGGTCGATGCCAATAGTGGTAATGTCATAACATCTGGACCTGAGTCCTGTATAAAGCTTGATGTTGTTGTCCTCGAAGGCGATTTTAACAATGAAGATGATGAAGATTGGAACCAAGAAGAATTTGAAAGCCATGTGGTGAAAGAACGCGAAGGAAAGAGACCTTTGTTGACTGGGGACCTGCAAGTGACACTGAAGGAAGGAGTTGGAACATTGGGGGAACTGACATTTACTGACAATTCAAGCTGGATAAGGAGCCGTAAATTCAGGCTTGGCATGAAGGTTGCAGCAGGTTTTGGCGACTCTATACGCATTCGCGAAGCCAAGACTGTGGCTTTCACTGTTAAAGATCATAGAGGAGAATTATACAAGAAGCACTATCCTCCTTCATTTAATGATGATGTATGGAGATTGGAGAAAATAGGCAAGGATGGGTCATTTCACAAAAAGTTGAATAATGCAGGAATATTCACAGTTGAAGACTTTCTTCGACTTGTGGTTAAGGATCAACAGAAATTGCGAAATATCCTTGGGAGTGGTATGTCAAACAAGATGTGGGAAGCTCTCTTAGAACATGCAAAGACATGTGTTCTAAGTGGGAAGCTTTATGTTTATTATCCAGAGGATACAAGAAATGTTGGTGTTATTTTTAACCACGTCTATGAGCTGCGTGGCCTTATAACAGGAGAGCAATTCTTCTCTGCTGATTCTCTCAATGATAATCAGAAGGTTTACGTAGATTCATTGGTGAAAAAGGCATATGACAATTGGGAGCAGGTTATAGAGTACGATGGTAAATCACTTATAGATGCCGAGCAAAACAACAATACTGCTGTACCTGAAAATGAACTTCATGTTGAGGCAATTGATTTTGATGGTGGTTTAGACCATCAACTGCAAATGCCATCCCTCCCCATGTCTGTTACTTCTGAACACCAGATTAATTCAGGGATGCCAGTTGGAGGTTATATCAATAATATGGTGACAAGGTATCCAAGCCAGGCATTGATTGGAAATTCCAGCTCTCGGAGTCAGTTCGAAGGCTCATTATATCTGTCTAATGATCAATTAATAAGCAATGATCACCAATCTCTAAGCTCTAGAAATGATCATAGCACCGTTGGGTTGGCTCTTGGTCCTCCTCAATCGACATCAGGTTTCCATGCTGGTAGCTCTTCTATTCAACCATCTGCACCAAATCCTTTTGATGATTGGTCACACAACAGGGACAAGGGCGTTGATGACTTCTTTTCGGAAGATGAAATCCGTGTTAGAAGTAATGAGATACTAGAGAATGAAGACATGCAGCACTTGCTTCGCCTTTTCAGCATGGGTGGTCATGCTTCCATGAATACCGAGGATGGTTATTCCTTCCCATCATTCATGCCATCTCCTATGCCGAACTTCGATGAGGACCGCTCTCGTCCTGGTAGAGCTGTTGTGGGATGGCTGAAGATCAAGGCAGCAATGAGGTGGGGTTTCTTTATCAGAAAGATAGCAGCTGAGAAGCGGGCTCAGATAGAGGAGTTAGACGAGTAG 1908 0.435 MQRPTTDGVNMGKRTLEGGEDDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARLNGTGRSSPKRIEGPDGRNLRLQFRSRLALPLFTGGKVEGEQGAPIHVVLVDANSGNVITSGPESCIKLDVVVLEGDFNNEDDEDWNQEEFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGMKVAAGFGDSIRIREAKTVAFTVKDHRGELYKKHYPPSFNDDVWRLEKIGKDGSFHKKLNNAGIFTVEDFLRLVVKDQQKLRNILGSGMSNKMWEALLEHAKTCVLSGKLYVYYPEDTRNVGVIFNHVYELRGLITGEQFFSADSLNDNQKVYVDSLVKKAYDNWEQVIEYDGKSLIDAEQNNNTAVPENELHVEAIDFDGGLDHQLQMPSLPMSVTSEHQINSGMPVGGYINNMVTRYPSQALIGNSSSRSQFEGSLYLSNDQLISNDHQSLSSRNDHSTVGLALGPPQSTSGFHAGSSSIQPSAPNPFDDWSHNRDKGVDDFFSEDEIRVRSNEILENEDMQHLLRLFSMGGHASMNTEDGYSFPSFMPSPMPNFDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIAAEKRAQIEELDE 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00493 635 Pfam Calmodulin binding protein-like N-terminal domain 94 241 IPR046831 -
Vivi1g00493 635 MobiDBLite consensus disorder prediction 485 529 - -
Vivi1g00493 635 MobiDBLite consensus disorder prediction 485 525 - -
Vivi1g00493 635 MobiDBLite consensus disorder prediction 14 28 - -
Vivi1g00493 635 MobiDBLite consensus disorder prediction 1 28 - -
Vivi1g00493 635 Pfam Calmodulin binding protein C-terminal domain 324 386 IPR046829 -
Vivi1g00493 635 Pfam Calmodulin binding protein central domain 255 319 IPR046830 -
Vivi1g00493 635 PANTHER OS02G0177800 PROTEIN 13 558 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00493 Vivi-Chr1 10451873 10457626 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00493 1 630 Calmodulin-binding Proteins AT5G57580 66.197 0.0 846
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00493 - - cam:101488801 1155.58