Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00475 ATGGTGTCTTCAAAAAACATAGGAAAATATAGACTTGGCAGAACCATAGGAGAAGGTACATTCTCTAAGGTTAAGCTTGCTTTCAATGGCAACAATGGTGAGAAGGTAGCAATCAAGGTCATTGACAAGAATATGGTCTTGAAAAACAATCTTAAGTATCAGGTACAAAGTGAGATTAGAACAATGAAACTTCTACATCATCCTAATATTGTTAGAATTCAAGAGGTTATTGGTACAAAGACAAAGATATACATTGTGATGGAATATGTATCAGGAGGTCAACTGTTGGACAAGATGTCATATGTTGATAAGTTGAATGAATGTGAGGCAAGAAAAATATTCCAGCAACTTGTTGATGCCGTCGATTATTGCCATAACAAGGGAGTTTTTCATCGCGATTTAAAGCCAGAAAACTTGCTTCTTGACAGCCAGGGAAATCTCAAAGTGTCTGATTTTGGATTATCTGCATTGAGTAAGCCTAATGATGTCCTAAACACAAGGTGTGGATCGCCGTGCTACGTGGCTCCTGAGCTGCTGATGAGCAGAGGGTATGATGGAGCAGCTGCTGATGTTTGGTCATGTGGTGTGATTCTTTTTGAGTTACTGGCTGGTTTTCTTCCATTTGATGACCAAAACTTGATGAGCTTATACCATAAGATATGCAGAGCAAAATATGTATGCCCCCCATGGTTTATTCAAAGTCAAAAGAAGTTAATTACCAAAATACTCGAACCGCATCCTGAAAAGCGGATAAATATTTCAGATATTATTGAAAATGAGTGGTTTCAAATAGATTACAAACCATCTTGTGCGCATGAAATTGATCCGATTATTAACCTGGATGACAAAAGTGATGCTTTTGACCCAATTGAGGATAAAACTACGAAGTCAACAATAACCAAGTCCTCGAGCTTCATTAATGCGTTTCAACTGATAGCCATGTCTCAGGACCTTGATCTATCTGCACTTTTTGAAGAACAGGATCACAAGAAGCAGATAACAATGTTCGGATCCCAACATACAATCAGTGAAACAGTAGAAAAAATAGAAGCTGCTGCAACAGATGTGAGACTGTCAGTGATGAAAATGAACAATTTTAAGATGAAAATGCACCCAAAACAGACATTGACTAGATGTTCTAGATCATACTTTGACCTATCTGCTGAGGTGATAGAAGTTGCTCCGGCTCATTGTGTTGTACAAATATCAAAATCTGCAGGAGATCTAAGAATGTACAATGAATTTTGTGAAAGTTTATCAAGTCTGCTGAAAGAAAAATCTAGTATGTCATCGCATGACCGAGACTCGGTGGATCAATGCAAAGTTAGCAGCAGAGAAAAGAAAGATGATGAATGCTATGCAAAGCCAAACCATGAAGATTTCCGTGGCTATAACTCTGCTTGA 1404 0.3803 MVSSKNIGKYRLGRTIGEGTFSKVKLAFNGNNGEKVAIKVIDKNMVLKNNLKYQVQSEIRTMKLLHHPNIVRIQEVIGTKTKIYIVMEYVSGGQLLDKMSYVDKLNECEARKIFQQLVDAVDYCHNKGVFHRDLKPENLLLDSQGNLKVSDFGLSALSKPNDVLNTRCGSPCYVAPELLMSRGYDGAAADVWSCGVILFELLAGFLPFDDQNLMSLYHKICRAKYVCPPWFIQSQKKLITKILEPHPEKRINISDIIENEWFQIDYKPSCAHEIDPIINLDDKSDAFDPIEDKTTKSTITKSSSFINAFQLIAMSQDLDLSALFEEQDHKKQITMFGSQHTISETVEKIEAAATDVRLSVMKMNNFKMKMHPKQTLTRCSRSYFDLSAEVIEVAPAHCVVQISKSAGDLRMYNEFCESLSSLLKEKSSMSSHDRDSVDQCKVSSREKKDDECYAKPNHEDFRGYNSA 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00475 467 Gene3D Transferase(Phosphotransferase) domain 1 90 280 - -
Vivi1g00475 467 Pfam NAF domain 304 362 IPR004041 GO:0007165
Vivi1g00475 467 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Vivi1g00475 467 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Vivi1g00475 467 CDD CIPK_C 307 424 - -
Vivi1g00475 467 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g00475 467 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g00475 467 FunFam Non-specific serine/threonine protein kinase 3 303 - -
Vivi1g00475 467 ProSitePatterns Protein kinases ATP-binding region signature. 16 48 IPR017441 GO:0005524
Vivi1g00475 467 FunFam Non-specific serine/threonine protein kinase 301 427 - -
Vivi1g00475 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Vivi1g00475 467 SUPERFAMILY Protein kinase-like (PK-like) 7 263 IPR011009 -
Vivi1g00475 467 FunFam Non-specific serine/threonine protein kinase 1 89 - -
Vivi1g00475 467 MobiDBLite consensus disorder prediction 426 467 - -
Vivi1g00475 467 MobiDBLite consensus disorder prediction 427 458 - -
Vivi1g00475 467 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 418 - -
Vivi1g00475 467 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi1g00475 467 Gene3D Kinase associated domain 1, KA1 301 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00475 Vivi-Chr1 10121365 10124403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00475 2 419 CBL-interacting serine-threonine protein kinases AT1G01140 48.104 1.30e-141 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Vivi1g00475 Pkinase 8.3e-71 CL0016