Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00448 ATGACTCTCATTTCTTCGCTCTGTTCCTTCCCTCCAATTCACTCTTCTCCTTCTTCCGCCTTTCCAAATTCCGCATCAACATTCTCAAATCACAACACCATCTCCAACTTCAAACCTCAAATCCAATCCTCATCTTCTTCTACAAACGTTTGCACCCAAAAAATCGACACATCCTTGATCACCATCGCCGAATCTTTCTACGATGATGAACTCTGGGCAGCTTCCTCCCTCCGTATCCGTTCCTTCAATGAATTCCGTCCCGATACATATGGAGTCCAAGATCATGCGAAATACTTGACTGAGCGTGAGTTTGAAGCATTGAAAGAGCGGATTTCAGGGAAGAGGATTGGTTTTAGAAGAGTCTCTTGCATAAATGCTTCTCTTCCTGTGTCTCATATATCAGGCATCTATGATGATTTATGTTCTTCATGTAAGTTTTCTACTTTTGGAGAAGACAGGATAGTAGTTGGTTCTCTTGATCTGAATCAGTGCTTGAGTCTTCCGGATGAAATTGTAGGGATGAAGCCAAAGGCTAGCGGAGCTGATACTACAAGGGCGTACCTCAGCAATGTGTGTGTTGCGCGAGAGTTGCACAGAAATGGTTTGGCCTATGATCTTCTCGAAAAGTCAAAGTTAGTTGCTCGTAATTGGGGCATAACAGATTTATATGTCCATGTTGCCGTTGACAATGAACCAGCAAAAAAATTGTACATGAAGAGTGGGTTTGTCTACGAGAGTGATGAACCTGCATGGCAGGCCAGGTTTCTTGATAGACCGCGAAGACTTCTGCTATGGATGGGGCTTTCAGTCTCCTAA 816 0.4363 MTLISSLCSFPPIHSSPSSAFPNSASTFSNHNTISNFKPQIQSSSSSTNVCTQKIDTSLITIAESFYDDELWAASSLRIRSFNEFRPDTYGVQDHAKYLTEREFEALKERISGKRIGFRRVSCINASLPVSHISGIYDDLCSSCKFSTFGEDRIVVGSLDLNQCLSLPDEIVGMKPKASGADTTRAYLSNVCVARELHRNGLAYDLLEKSKLVARNWGITDLYVHVAVDNEPAKKLYMKSGFVYESDEPAWQARFLDRPRRLLLWMGLSVS 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00448 271 Pfam Acetyltransferase (GNAT) family 169 242 IPR000182 GO:0016747
Vivi1g00448 271 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 77 271 IPR000182 GO:0016747
Vivi1g00448 271 CDD NAT_SF 169 225 - -
Vivi1g00448 271 PANTHER OS08G0260000 PROTEIN 38 269 - -
Vivi1g00448 271 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 180 253 IPR016181 -
Vivi1g00448 271 FunFam uncharacterized protein LOC106768637 131 258 - -
Vivi1g00448 271 Gene3D - 80 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00448 Vivi-Chr1 9084580 9087491 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vivi1g00448 Acetyltransf_1 2.1e-08 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00448 - - gmx:100802268 415.231