Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00447 ATGACTCTCATTTCTTCGCTCTGTTCCTTCCCTCCAATTCACTCTTCTCCTTCTTCCGCCTTTCCAAATTCCGCATCAACATTCTCAAATCACAACACCATCTCCAACTTCAAACCTCAAATCCAATCCTCATCTTCTTCTACAAACGTTTGCACCCAAAAAATCGACACATCCTTGATCACCATCGCCGAATCTTTCTACGATGATGAACTCTGGGCAGCTTCCTCCCTCCGTATCCGTTCCTTCAATGAATTCCGTCCCGATACATATGGAGTCCAATTTTCTACTTTTGGAGAAGACAGGATAGTAGTTGGTTCTCTTGATCTGAATCAGTGCTTGAGTCTTCCGGATGAAATTGTAGGGATGAAGCCAAAGGCTAGCGGAGCTGATACTACAAGGGCGTACCTCAGCAATGTGTGTGTTGCGCGAGAGTTGCACAGAAATGGTTTGGCCTATGATCTTCTCGAAAAGTCAAAGTTAGTTGCTCGTAATTGGGGCATAACAGATTTATATGTCCATGTTGCCGTTGACAATGAACCAGCAAAAAAATTGTACATGAAGAGTGGGTTTGTCTACGAGAGTGATGAACCTGCATGGCAGGCCAGGTTTCTTGATAGACCGCGAAGACTTCTGCTATGGATGGGGCTTTCAGTCTCCTAA 660 0.447 MTLISSLCSFPPIHSSPSSAFPNSASTFSNHNTISNFKPQIQSSSSSTNVCTQKIDTSLITIAESFYDDELWAASSLRIRSFNEFRPDTYGVQFSTFGEDRIVVGSLDLNQCLSLPDEIVGMKPKASGADTTRAYLSNVCVARELHRNGLAYDLLEKSKLVARNWGITDLYVHVAVDNEPAKKLYMKSGFVYESDEPAWQARFLDRPRRLLLWMGLSVS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00447 219 FunFam uncharacterized protein LOC106768637 86 206 - -
Vivi1g00447 219 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 50 219 IPR000182 GO:0016747
Vivi1g00447 219 CDD NAT_SF 117 173 - -
Vivi1g00447 219 PANTHER OS08G0260000 PROTEIN 38 92 - -
Vivi1g00447 219 Pfam Acetyltransferase (GNAT) family 96 190 IPR000182 GO:0016747
Vivi1g00447 219 Gene3D - 24 201 - -
Vivi1g00447 219 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 103 201 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00447 Vivi-Chr1 9084568 9087491 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vivi1g00447 Acetyltransf_1 6.9e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00447 - - gmx:100802268 303.138