Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00433 ATGGGTGTTCTAGATGGTTATCTTCCGGTATTGGTTATGATAGGGTTACAGTTTCATTATGCACTGCTTGCCATGTTTACAAGAGCTGCTCTATTAGATGGATTGACTCCAACTGTCTTTGTAGTCTATAGGCAAGGGATAGCCACTTTGTCATTGGCACCTATCATCTTTTCATCTTATAAAAGGAGACAATCTTTGAAGAGTTCACTAGGATGGAAGAGTTTCTCTATGATGTTTATGACCTCTCTTATTGGGGTTACAGCAAATCAGAATGCATATTTTAGTGGACTATTCTATGCATCTTCTACGGCAGCCACTGCTATGAGTAATTTGATACCTGCATTAACTTTTGTATTTGCAGCAATTTTGGGATTTGAGAAAATCAATCTTCGAAGTTTAAGAAACGTGGCCAAGATATTAGGGACAGTTTGTTGTGTCAGTGGAGCCTTAACCATGGCATTTATCAAAGGACATAAGCTATTACACATGGAGTTCTTTCTTCCTGATTCCATACATCTCACTTCAAGTGGAGATGATAATTGGATTCTGGGTTGTTTGTTGCTCTTAGCAAGTAGTGTTTTTTGGTCTTGTTGGATGATTATGCAGGTACCGATTTCTGCATCTTGCCCGGATCATATATTATCGACTTTTTGGATGTGTCTCTTTGCTACGATACAGTCTGCTATATTTGCACTGCTGAAAGAGCAGAATCTTCAATCATGGATTCTACCTTCACCTTTACAAATTTCATGCAGTTTATATGCAGGAATTGGAATTGCTCTTAGTTTTTTCATTCAATCCTGGTGCATATCAGAAAGAGGTCCATTGTATTGTGCAATGTTTAACCCTCTAGCAACTGTCATCACAGTGTTAGTAGCTGCGACATTCCTAGAAGAAGAGCTATACGTTGGAAGTTTGGTTGGGGCTTTTGGAGTGATCACTGGTTTGTATATTGTGTTATGGGGAAAAGCCAAAGACTTTGATGGGACAAAACAAAAACTGCCACAATCAAACATGGAGGATGATGATATAACTAATAGAATAGATTTGGAAGAACCACTTCTGGCAGACAAATCAAAATCAGAGATAAAGATGGAGCCCTGA 1104 0.3859 MGVLDGYLPVLVMIGLQFHYALLAMFTRAALLDGLTPTVFVVYRQGIATLSLAPIIFSSYKRRQSLKSSLGWKSFSMMFMTSLIGVTANQNAYFSGLFYASSTAATAMSNLIPALTFVFAAILGFEKINLRSLRNVAKILGTVCCVSGALTMAFIKGHKLLHMEFFLPDSIHLTSSGDDNWILGCLLLLASSVFWSCWMIMQVPISASCPDHILSTFWMCLFATIQSAIFALLKEQNLQSWILPSPLQISCSLYAGIGIALSFFIQSWCISERGPLYCAMFNPLATVITVLVAATFLEEELYVGSLVGAFGVITGLYIVLWGKAKDFDGTKQKLPQSNMEDDDITNRIDLEEPLLADKSKSEIKMEP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00433 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 218 324 - -
Vivi1g00433 367 SUPERFAMILY Multidrug resistance efflux transporter EmrE 44 155 - -
Vivi1g00433 367 Pfam EamA-like transporter family 183 320 IPR000620 GO:0016020
Vivi1g00433 367 Pfam EamA-like transporter family 9 150 IPR000620 GO:0016020
Vivi1g00433 367 PANTHER WAT1-RELATED PROTEIN 8 326 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00433 Vivi-Chr1 8439945 8442366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00433 1 364 Nodulin-like Gene Family AT4G30420 45.238 5.01e-112 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00433 - - psat:127138496 553.132