Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00414 ATGGCAGTTACTTTGTATAACCTTAAATCTGAATCTGGGTTGAAGAAACTTAACGAGTACCTTCTTACTCGCAGTTATATCACTGGGTACCAAGCTTCAAAGGATGATATCACTGTCTATTCAGCTTTGTCATCAGTTCCATCAGATGAATATGTGAATGTTGCTAGGTGGTACAAGCACATTGATGCTTTGTTGAGAATTTCTGGTGTTTCTGGCGAAGGATCTGGTGTCATTGTGGAATCTTCTCTTGTTGCGGAAGAGGCTATTGCCACTCCTCCAGCTGCTGACACAAAGGCCACTGAAGCAGAGGATGACGATGACAGTGATGTGGATTTGTTTGGTGAAGAGACTGAGGAAGAGAAGAAGGCAGCTGAGGAACGGGCAGCAGCTGTGAAGGCATCTGGCAAAAAGAAAGAGAGTGGAAAATCATCTGTTTTGTTGGATGTGAAGCCATGGGATGATGAAACCGACATGAAAAAGCTTGAAGAAGCAGTGAGATCTGTTAAGTTGGACGGGTTGTTATGGGGTGCATCCAAACTTGTTCCTGTTGGGTACGGTATCAAGAAACTTCAAATTATGATGACCATTGTTGACGACTTGGTTTCTGTCGACAATATGGTTGAGGATTATCTTACTGTCGAGCCGATCAACGAGTATGTCCAGAGTTGTGACATTGTGGCCTTCAATAAAATATAA 696 0.4296 MAVTLYNLKSESGLKKLNEYLLTRSYITGYQASKDDITVYSALSSVPSDEYVNVARWYKHIDALLRISGVSGEGSGVIVESSLVAEEAIATPPAADTKATEAEDDDDSDVDLFGEETEEEKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVKLDGLLWGASKLVPVGYGIKKLQIMMTIVDDLVSVDNMVEDYLTVEPINEYVQSCDIVAFNKI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00414 231 Pfam EF-1 guanine nucleotide exchange domain 144 231 IPR014038 GO:0003746|GO:0006414
Vivi1g00414 231 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 220 231 IPR001326 GO:0003746|GO:0005853|GO:0006414
Vivi1g00414 231 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 8 231 - -
Vivi1g00414 231 CDD EF1B 140 231 IPR014038 GO:0003746|GO:0006414
Vivi1g00414 231 Gene3D - 2 75 - -
Vivi1g00414 231 FunFam Elongation factor 1-beta 1 like 136 231 - -
Vivi1g00414 231 Gene3D - 135 231 IPR014717 -
Vivi1g00414 231 Coils Coil 114 134 - -
Vivi1g00414 231 FunFam Elongation factor 1-delta 1 3 78 - -
Vivi1g00414 231 SMART EF1_GNE_2 142 231 IPR014038 GO:0003746|GO:0006414
Vivi1g00414 231 SUPERFAMILY eEF-1beta-like 139 231 IPR036219 -
Vivi1g00414 231 SUPERFAMILY GST C-terminal domain-like 8 67 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00414 Vivi-Chr1 8161204 8163229 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00414 7 231 Eukaryotic Initiation Factors Gene Family AT2G18110 81.416 1.28e-116 330