Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00383 ATGGATAACCAACAACAAGAGAAACTGCTGAACTCAGAATCAGAGAAATCCGAATCTGAACAACAAGAGAAACTGCCGAAATCGGAATCAGAAAAAGAAGAATCAGAGTCTGAATCATACGAAGATGAATCAGAGTCGGAATCAGAAGAAGATGAATCAGGATCGGAAACTGAGTCAGACTTGGATTGGGAATCGAAACCAATCGAATATCTAAAAGAAAAGTACGAAGACGATCCGTGTCCATGTTATTTTTCATGTGATAGGTTTGTGTACAAGAATAAAGCAATGATAAAACAAGAAGAGGATAGTGAAAAGGCCGTGGATGAGTATTGGGAGAGGAGTCGTAACATAAGTCCCTACGATGCTATTCCTGTTCCACCTTTGGCGAATTTACGTTTCAGTAACTTCCCAAGACCCATTACCATTACAGAAGGATGGCGCCCACGTTTCATTCACCTCTCCAAACTTGCTCTGGAAAGCTACAACCATGACAATCAGGGTTTAAATTACGTGTTTGAAGACATTGTCAAAGCAGATGATGATTCTTTCTTTAACTATCTCAATAGTCTTTCTCCTTTAAAGACCTTGAACTCACCTCCCATGGATTATTCTCTTTTCACATCACCTGATGTCACTTTTTTTGAGGATTCCACATTCTTCGATTCTAGGGATAACCTTTTCGACACATCAATCCCTCAAGTTTCGTGCGAGAATGTAAATGTTCCTACTTATTCTACTAATTTATCTCATGATTCAACTGAGTCATCTAGTCAAGAAGCTGTGCAATATGGTTCTTGTAGCCCAGAAGATCATCCACTAATCTCAAGGGATGATGTTAACTACCTTCTTGGATTACTTGGCATGCAAGAACCAAATGGTACCAATGTACCAGACCACTCTCTCAAAGATTCAAATGAGGCAAACACTGAAGTGCCAGATTGTGATTACAATAGCTTAATTAGTACAACACAATCTTTGATTCCTTTACCACAATCTACCACTAACAGTAGTAATTATACAATGCATACTGTTGATCCACCTGCTTCTACTTCAATACATGAGTCTGAAAATAATCCTTATCAACCAATACCTGCCACTTACAGAAATCAAACATGGAACTATCTTGCCAATTTCCCTTTAATGGATACCAATCCAATTCAGACAGGGAATGCCGAGCTTGTGCGTATTAGACACAGTATTGAGATGGGTTTTCTAGACTATGACAAGACCAGTTATACTTCTAACATCAGTTCCTGTTCTTCAAAATCTGATAAGAGGAATGCAATTCCAGCCTCAAATCATTACAAAGGCATTGAAAATGAAATGACATTTCCTGGAAGGAATCCTCAACTGCCGAGCTGCACTTCTTCTTTGGAAAATCACCTATTGCAGGTCCCTGCATCAGTGGAAAATCATTTGGGGCCATCTGATTATGAATTTCAGTCTACAAAAGATTTCACTAAGTTTTTAGTTCACATTACGGGTGAAGATTTCTGCGGCAGTACTCTCAAAATGGAGAGTAAACAGTTGGATCCTCCAAACATGAAAAGGAAGAGGAAAGGTCAGATTGATCTAGGTGCTTCTTGTTCAAAACATGAAAAAGAAGAGGAAAGTGCTGATTTCTGTCAGAGTACCCTCAGAAAGAAGAGGAAAATCCACAAATCAGGTCACTGTCAATGTAAAAAAGCAAGCTGCCTGAGGAAATATTGTGAATGTTTTAAGGGTGGTGTTGGTTGCTCCCCAAGTTGTAAGTGTCAAGGATGTGAGAATATATATGGTAGAAACGATAGGGAAGCGGAAACAAAATCGGAGCTTGAAGAAACAGAAGCATTACAGATTTGTAGGTAG 1848 0.3907 MDNQQQEKLLNSESEKSESEQQEKLPKSESEKEESESESYEDESESESEEDESGSETESDLDWESKPIEYLKEKYEDDPCPCYFSCDRFVYKNKAMIKQEEDSEKAVDEYWERSRNISPYDAIPVPPLANLRFSNFPRPITITEGWRPRFIHLSKLALESYNHDNQGLNYVFEDIVKADDDSFFNYLNSLSPLKTLNSPPMDYSLFTSPDVTFFEDSTFFDSRDNLFDTSIPQVSCENVNVPTYSTNLSHDSTESSSQEAVQYGSCSPEDHPLISRDDVNYLLGLLGMQEPNGTNVPDHSLKDSNEANTEVPDCDYNSLISTTQSLIPLPQSTTNSSNYTMHTVDPPASTSIHESENNPYQPIPATYRNQTWNYLANFPLMDTNPIQTGNAELVRIRHSIEMGFLDYDKTSYTSNISSCSSKSDKRNAIPASNHYKGIENEMTFPGRNPQLPSCTSSLENHLLQVPASVENHLGPSDYEFQSTKDFTKFLVHITGEDFCGSTLKMESKQLDPPNMKRKRKGQIDLGASCSKHEKEEESADFCQSTLRKKRKIHKSGHCQCKKASCLRKYCECFKGGVGCSPSCKCQGCENIYGRNDREAETKSELEETEALQICR 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00383 615 MobiDBLite consensus disorder prediction 9 34 - -
Vivi1g00383 615 SMART CXC_2 553 594 IPR033467 -
Vivi1g00383 615 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 553 607 IPR044522 GO:0003700
Vivi1g00383 615 MobiDBLite consensus disorder prediction 1 65 - -
Vivi1g00383 615 Coils Coil 3 23 - -
Vivi1g00383 615 MobiDBLite consensus disorder prediction 35 58 - -
Vivi1g00383 615 ProSiteProfiles CRC domain profile. 558 593 IPR005172 -
Vivi1g00383 615 Coils Coil 30 50 - -
Vivi1g00383 615 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 557 590 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00383 Vivi-Chr1 7507460 7512649 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00383 547 611 CPP Transcription Factor Family AT3G22780 35.211 4.27e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Vivi1g00383 TCR 3.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00383 - - vvo:131639692 1165.6