Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00381 ATGCAGCAAGGTGATCAAACTGTTCTAAGCTTGAGACCTGGTGGTGGTCGAGGAAACAGGCTTCTCGCGCCTAGATTTGAATCGTCCTCTTCCAACTCATCGGTTTCCCCGGCTTTTGGTTCCTTTTCGTCTGATCTTCTTCGTCAACATGGTGCCGCTCAATCTCATTTTGCATTCAAGATTGGAGATTCACAGTTTGATGGCCATGAGCGGGTGCGATATTCCAGAGAAGAGCTCTTGCATATTAAGAAGACTGTTGAGGAGACCCCTGAGGAGATCCCTGAAGATATTTTAAAGCTCAGACATGAAATCGATGCTGAACTTTTTGGTGAAGATCAAAGTTGGGGTCGTGTCGAAAGCAATGCTCCAACTCAAACTCAAACTCGATATGCTGAACCAGATAATCGTGATTGGCGTGGCCGATCTGCGCAACTTCCGGTTAACGCAGATGAGAGGTCTTGGGATAATATCAAGGAGAATAGAGAGTTTGGCACTAGTCAACCAAATTCTCAGTACCCACGTTCTAGCCAAGGGGGAGGACCTGCTCCTACTCTAGTAAAGGCTGAGGTACCATGGTCTTTTAGAAGGGGAAGTCTCTCTGACAAGGACCGTGTCTTAAAAACAGTTAAAGGTATACTGAATAAGTTGACTCCAGAAAAATTTGATCTTTTGAAGGGTCAGTTGATCGATTCTGGAATTACATCAGCTGATATATTGAAGGGAGTTATTTCGCTGATATTTGACAAGGCAGTGCTTGAACCAACATTCTGCCCCATGTATGCGCAACTGTGTTCCGATCTTAATGAAAAGCTGCCCCCATTCCCATCTGAAGAACCTGATGGTAAAGAAATAACCTTTAAAAGAGTACTCTTGAATAACTGTCAGGAAGCTTTTGAAGGCGCTGGTAAATTGAGGGAAGAATTGGCTCAGATGACTTCTCCTGAGCAGGAGTCGGAGCGACGTGACAAGGAAAGGGTTGTCAAGATCCGTACCCTTGGAAACATCCGTTTAATTGGAGAGCTGCTGAAGCAAAAAATGGTTCCTGAAAAGATTGTCCACCACATTGTTCAGGAGCTTTTAGGAGCTTCTGACAGCAAGGTCTGTCCAGCTGAGGAAAATGTTGAAGCCATATGTCATTTTTTCAACACTATTGGCAAGCAGCTTGATGAAAGCCCAAAATCACGACGTATAAATGATATGTATTTTGGCCGATTGAAAGAATTGAGCACCAATCCCCAACTTGTACCAAGGATGAGATTCATGGTGCGCGATGTTATAGATTTGCGTGCTAGTAACTGGATCCCAAGACGGGAAGAGGCAAAGGCCAAAACCATATCTGAAATCCATTCAGAAGCCGAAAAGAATCTTGGGTTGCGTCCAGGTGCCACTGCTAATATGAGAAACACCCGTGTTTCTGGTATTCAAGGAAATACCAGCGCTGGAGGCTTTCCCATTGCACGACCTGGTACAGGAGGTTTAATGCCTGGTATGCCGGGTGTGAGGAAGATGCCTGGGATGCCTGGTATTGATAATGATAACTGGGAGGTGCCTAGGACTAGATCTATGCCAAGAGGAGACATGTCGCAAACTGGAGGACGTGGCCAGTCTCCTTTCCTTTCCAAGCCATCCCCTGCCCTAAACTCAAAGTTACTGCCTCAAGGTAGCAGTGGTCTTGTAAGTGGGAAAAATAGTGCACTGGTTCATGGAGGTCGTCCAACAAGCTTTGCTTCAGCTTTAGAGCCTACGCCTCAAATCCCTTCACCTGTTAAATCTGTTTCTGCTGCATCTCCTGAGAAGCCCCAGGCCCCAGCTGCAAAATTGAATATTGATGACCTTCAACGCAAAACCGTCTCTCTTCTGCAAGAGTATTTCAATGTTCGACTTTTGGATGAGGCATTGCAGTGCGTGGAGGAATTAAAAGCTCCGACTTATTACCCAGAGTTCGTCAAGGAAGCCATTTCCCTTGGGCTAGATAAAAGCCCGCCATGTGTTGAGCCTGTTGCTAAGCTTATTGAGCATCTGTTTTTGAAGAAGATTCTCTCTGCTAGAGACATAGGTACTGGTTGTTTATTATTTGCTTCATTACTTGATGATATTGGCATAGATTTACCAAAAGCACCAAGCAACTTTGGCGAGATAATAGGGAAACTAGTTTTGGCTGGTGGTTTGGACTTTAAGGTGGTTAGGGAAATCCTTAATAAGGTGAGTGATGACTACTTCCAGAAAGCAATATTCAAAGCCACACTCGAGGTAATTAGCTCTTCATCTGGGCAAGCTGTGTTGGATGCACAAGCATCTGATATTGAGGCATGCCAAGCTCTGCTCCAGTGA 2331 0.4509 MQQGDQTVLSLRPGGGRGNRLLAPRFESSSSNSSVSPAFGSFSSDLLRQHGAAQSHFAFKIGDSQFDGHERVRYSREELLHIKKTVEETPEEIPEDILKLRHEIDAELFGEDQSWGRVESNAPTQTQTRYAEPDNRDWRGRSAQLPVNADERSWDNIKENREFGTSQPNSQYPRSSQGGGPAPTLVKAEVPWSFRRGSLSDKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKGVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSEEPDGKEITFKRVLLNNCQEAFEGAGKLREELAQMTSPEQESERRDKERVVKIRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGASDSKVCPAEENVEAICHFFNTIGKQLDESPKSRRINDMYFGRLKELSTNPQLVPRMRFMVRDVIDLRASNWIPRREEAKAKTISEIHSEAEKNLGLRPGATANMRNTRVSGIQGNTSAGGFPIARPGTGGLMPGMPGVRKMPGMPGIDNDNWEVPRTRSMPRGDMSQTGGRGQSPFLSKPSPALNSKLLPQGSSGLVSGKNSALVHGGRPTSFASALEPTPQIPSPVKSVSAASPEKPQAPAAKLNIDDLQRKTVSLLQEYFNVRLLDEALQCVEELKAPTYYPEFVKEAISLGLDKSPPCVEPVAKLIEHLFLKKILSARDIGTGCLLFASLLDDIGIDLPKAPSNFGEIIGKLVLAGGLDFKVVREILNKVSDDYFQKAIFKATLEVISSSSGQAVLDAQASDIEACQALLQ 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00381 776 FunFam Eukaryotic translation initiation factor isoform 4G-2 197 433 - -
Vivi1g00381 776 Gene3D - 605 770 - -
Vivi1g00381 776 MobiDBLite consensus disorder prediction 1 34 - -
Vivi1g00381 776 MobiDBLite consensus disorder prediction 117 131 - -
Vivi1g00381 776 FunFam Eukaryotic translation initiation factor isoform 4G-2 605 766 - -
Vivi1g00381 776 SUPERFAMILY ARM repeat 606 762 IPR016024 -
Vivi1g00381 776 SMART ma3_7 612 724 IPR003891 -
Vivi1g00381 776 MobiDBLite consensus disorder prediction 161 178 - -
Vivi1g00381 776 Pfam MA3 domain 612 724 IPR003891 -
Vivi1g00381 776 Gene3D - 198 433 - -
Vivi1g00381 776 ProSiteProfiles MI domain profile. 611 733 IPR003891 -
Vivi1g00381 776 Pfam MIF4G domain 206 432 IPR003890 GO:0003723|GO:0005515
Vivi1g00381 776 MobiDBLite consensus disorder prediction 523 562 - -
Vivi1g00381 776 MobiDBLite consensus disorder prediction 161 185 - -
Vivi1g00381 776 MobiDBLite consensus disorder prediction 504 605 - -
Vivi1g00381 776 SMART if4_15 206 432 IPR003890 GO:0003723|GO:0005515
Vivi1g00381 776 MobiDBLite consensus disorder prediction 112 143 - -
Vivi1g00381 776 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 53 769 IPR045208 GO:0003743
Vivi1g00381 776 MobiDBLite consensus disorder prediction 577 591 - -
Vivi1g00381 776 SUPERFAMILY ARM repeat 200 434 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00381 Vivi-Chr1 7404969 7410762 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00381 1 774 Eukaryotic Initiation Factors Gene Family AT5G57870 63.591 0.0 950