Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00367 ATGGAGTTCAAATATCGTGCCGTCGACAACGTCAAACCACCACCAACCACGTCGCATTCTCCTTCCCCGGCCACATATCTGCCAGATCCATCACTTCAAATGGATGGTGGTTTTTCTGGTTTCAGACCACCGTTAACCGGGGAGGAGGCACTGCGGCGAGAACTTGAGAAGGAGGTAATCCGCAGAGAAATTTTGCGGCGGATGGAGCTGGAGGAAGAAGTGAGGAGGGAACTGGCAATGGAGCGGGAATTGGGGATTTCAGCACAGAGGCTGCCGAATGTTCAGGGACTAGCGTCGCAGTGGTCAAATCCAACTGTGATGAACTCTGTTATTGTTGGCCATATGGATTCGTCGCAACCAACGTTGATTCTGCCTCCTACGACAATCAACCCTTCTCCAGAGATTGATAACAAGGATAAAGTTATAGTGTTGGATAGGCCAGATCCCGAACTTTTTTATGCAAAGCGAAAAGCAACGACACTGGCTAATTCGGAGATTGGGCCTTCTACATTTAATTTGAAGAAAAAACTGAAGCAAGAGTGGAGTTGTGCACTATGTGGGATTAAAGCCACAAGTGACAGTGGCTTGAATGCTCATCTAAATGGTAAGAAGCACAAGACTAAGGAAGCTGGACAAAATAGAGAGATTTGCAAGAGCAACAAAGAAAGTGAAAAAATTGTGAATGTCAAGGCCACAGTGGATACATCGATGGTTCATAAGAGTAAAAATGAATCTAAAAGTGAAGAGCAACTTGTAGAGATAATGGTTGATAATGGCATAACTTCAATAAAATCCAAAAATAAAGACGATGCAACTGAGGAAACGAAGAAGATAAGTGCATAA 843 0.4413 MEFKYRAVDNVKPPPTTSHSPSPATYLPDPSLQMDGGFSGFRPPLTGEEALRRELEKEVIRREILRRMELEEEVRRELAMERELGISAQRLPNVQGLASQWSNPTVMNSVIVGHMDSSQPTLILPPTTINPSPEIDNKDKVIVLDRPDPELFYAKRKATTLANSEIGPSTFNLKKKLKQEWSCALCGIKATSDSGLNAHLNGKKHKTKEAGQNREICKSNKESEKIVNVKATVDTSMVHKSKNESKSEEQLVEIMVDNGITSIKSKNKDDATEETKKISA 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00367 280 PANTHER OS06G0651300 PROTEIN-RELATED 1 257 - -
Vivi1g00367 280 Pfam Zinc-finger of C2H2 type 181 205 - -
Vivi1g00367 280 SUPERFAMILY beta-beta-alpha zinc fingers 168 212 IPR036236 -
Vivi1g00367 280 Gene3D Classic Zinc Finger 171 214 - -
Vivi1g00367 280 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00367 Vivi-Chr1 7207644 7208738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00367 181 277 C2H2 Transcription Factor Family AT2G19380 29.703 9.97e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00367 - - vvo:131616058 317.005