Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00355 ATGGGTTTTCTGGATTATGACAAGACCAGTTATACTTCAAACATCACTTCCTGTTCTTCAAAATCTGGTGAGAAGAATGCTAGTAATGAAAATGGTTTTGGAATTCCAGCCTCAGATCATTACAGATGGAATCCTGAACTGCCGAGCTGCAATTCTTCCTTGCATCTTTCTGAAAGCCACCTATCGCAGCTCTCCGCGTCAATGGAAAATCATTTGGGGCCATCTGATAATGAAGTTCAGTCTACAAAAGATTTCACTAAGTTTTTAGTTCACATTACGGGTGAAGATTTCTGTGGTAGTACCCTCAAAATGGAGAGTAAACAGTTGGATCCTCCAAACATGAAAAGGAAGAGAAAAGGTCAGATTGATCTAGGTGCTTCTTGTTCAAAACATGAGAAGGAAGAGGAAAGTGCTGATTTCTGTCAGAGTACCCTCAGAAAGAAGAGGAAAATCCACAAATCAGGTCACTGTCAATGTAAAAAAGCAAGCTGCCTGAGGAAATATTGTGAATGTTTTAAGGGTGGTGTTGGTTGCTCGCTAAGTTGTAAGTGTCAAGGATGCAAGAATATATATGGTAGAAACGATACGGAGGCGGAAACAAAATCAGAGCTTGAAGAAACAGAAGCATTACATATTTTCAGACCATTGGAAAGATGTAGTGCTAAATTGTTTGGCAGCCAAAATAAAGAGTTCGTGGAATCAATTGCTACTGGATCAGTCTATTCATATGAAAATATACAATGA 744 0.3898 MGFLDYDKTSYTSNITSCSSKSGEKNASNENGFGIPASDHYRWNPELPSCNSSLHLSESHLSQLSASMENHLGPSDNEVQSTKDFTKFLVHITGEDFCGSTLKMESKQLDPPNMKRKRKGQIDLGASCSKHEKEEESADFCQSTLRKKRKIHKSGHCQCKKASCLRKYCECFKGGVGCSLSCKCQGCKNIYGRNDTEAETKSELEETEALHIFRPLERCSAKLFGSQNKEFVESIATGSVYSYENIQ 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00355 247 ProSiteProfiles CRC domain profile. 157 192 IPR005172 -
Vivi1g00355 247 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 152 208 IPR044522 GO:0003700
Vivi1g00355 247 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 156 189 IPR005172 -
Vivi1g00355 247 SMART CXC_2 152 193 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00355 Vivi-Chr1 6990255 6991525 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00355 143 215 CPP Transcription Factor Family AT4G14770 37.975 2.71e-07 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Vivi1g00355 TCR 2.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00355 - - vvo:131600299 439.113