Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00350 ATGCCTTCACGCTGTGAAATTTGCTGCGAGGTTATGATCGCCGTCTTGCTCCCTCCACTCGGCGTTTGTCTCCGCCATGGTTGCTGCACTGTTGAATTCATCATTTGCTTGCTGCTTACTATTCTAGGTTATATTCCTGGTATAATTTATGCTCTTTATGCGATTATCTTTGTTGATCGTGATCAGTACTTTGATGAATATAGGCGTCCTTTGTATGCACAATCACAATACTAG 234 0.4231 MPSRCEICCEVMIAVLLPPLGVCLRHGCCTVEFIICLLLTILGYIPGIIYALYAIIFVDRDQYFDEYRRPLYAQSQY 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00350 77 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 4 59 IPR000612 GO:0016020
Vivi1g00350 77 Pfam Proteolipid membrane potential modulator 9 55 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00350 Vivi-Chr1 6940094 6940771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00350 1 75 RCI2 Gene Family AT4G28088 80.263 6.10e-42 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00350 - - gmx:100306426 154.066