Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00257 ATGGAGTCAAATATTGCCCCCGACAGGGTTTACGTCCTTCACGTTGAAGCCCAACCCAAACCAAGCCCCCTCCGTAAAATGGTAGCAGTCGCCTCCATCGCTGCCGGGATACAATTCGGCTGGGCTCTCCAGCTCTCCTTACTCACACCCTACATCCAGCTCCTCGGAGTCCCTCACAAGTGGGCAGCCAACATCTGGCTCTGCGGTCCCATCTCCGGCTTGATAGTCCAGCCTATCGTGGGATACTACAGCGACAGATGCCGTTCCCGCTTCGGTCGCCGTCGTCCTTTCATATTCTTCGGTGCATTAGCAGTCGCTATTGCCATCATCCTCATCGGCTTCGCGGCGGATTTCGGCCGCAATTTAGGCGACGATATAAGTAAGAAAACCCGTCCGCGTGCTGTTGTTATCTTTGTGATAGGGTTTTGGATACTCGATGTTGCTAATAACATGCTTCAAGGACCTTGCCGTGCTTTCCTCGGTGACCTAGCTAACGGTGATCACCGTCGAATGAGAACCGGTAATGCGTTGTTTTCATTCTTCATGGCCGTTGGTAACGTTCTAGGTTACGCTGCTGGCTCTTACAGTAAACTCCATAATATTTTCCCTTTCGCCGAAACCAAAGCTTGTGACGTTTTTTGTGCGAATCTCAAAACCTGTTTCTTCTTCTCTATTATCCTCCTCGTCGGAGTTTCTGCATTTGCTCTTATCTACGTAAAAGACACTCCAATAGAATCAACGCAAACCAAATCACAATCAGAGTCCGAAGATGATAAAACCGATTCTTGCTTTGGCGAATTAGTAGGTGCTTTCAGTGGCCTTGAGAAGAAGATGTGGATGTTAATGTTGGTAACCGCTATAAACTGGGTTGCATGGTTCCCTTTCTTCTTGTTCAACACCGATTGGATGGGCCGTGAAGTGTACGGTGGCGAGAGCGGTGAAAAAGCTTTCGACACCGGTGTGCGTGCCGGTGCGTTGGGACTCATGATTAATGCGGTTGTGTTGGCTGCAATGTCTTTGGCGGTTGAACCGTTGAGCCGTTTGGTTGGTGGTGCTAAGAGGTTATGGGGAATCGTTAATATTATTCTCGCTCTTGGGATGGTTATGACGGTTATTATTAGCAAAGCGGCGGAGCATGAACGCCGTGTCAGTAGCGGAGACACGCCGTCTGCCGGTATTAAAGCTGCCGCATTTGTTTTCTACGCCCTCCTTGGAATCCCTATGGCGATTAATTTTAGTGTCCCGTTTGCTTTAGCATCTATTTACTCAACCTCATCAGGAGCAGGGCAAGGTTTATCTCTTGGAGTTCTCAATATTTCAATTGTGATTCCACAGATGATAGTGGCACCGTTAAGTGGACCATGGGATTCTTTGTTTGGCGGCGGAAACTTGCCATCATTTATTGTCAGTGCAGTTGCGGCGGTCATCAGTAGTATTTTGGCAGTTGTCCTTCTACCTACACCAAAACCAGCGGATGTTGCCAAGGCTTCAAGCGCCACACCCGGTGGTTTTCATTAA 1518 0.4875 MESNIAPDRVYVLHVEAQPKPSPLRKMVAVASIAAGIQFGWALQLSLLTPYIQLLGVPHKWAANIWLCGPISGLIVQPIVGYYSDRCRSRFGRRRPFIFFGALAVAIAIILIGFAADFGRNLGDDISKKTRPRAVVIFVIGFWILDVANNMLQGPCRAFLGDLANGDHRRMRTGNALFSFFMAVGNVLGYAAGSYSKLHNIFPFAETKACDVFCANLKTCFFFSIILLVGVSAFALIYVKDTPIESTQTKSQSESEDDKTDSCFGELVGAFSGLEKKMWMLMLVTAINWVAWFPFFLFNTDWMGREVYGGESGEKAFDTGVRAGALGLMINAVVLAAMSLAVEPLSRLVGGAKRLWGIVNIILALGMVMTVIISKAAEHERRVSSGDTPSAGIKAAAFVFYALLGIPMAINFSVPFALASIYSTSSGAGQGLSLGVLNISIVIPQMIVAPLSGPWDSLFGGGNLPSFIVSAVAAVISSILAVVLLPTPKPADVAKASSATPGGFH 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00257 505 NCBIfam sucrose/proton symporter 23 489 IPR005989 GO:0005886|GO:0008515|GO:0015770
Vivi1g00257 505 Pfam MFS/sugar transport protein 32 414 - -
Vivi1g00257 505 SUPERFAMILY MFS general substrate transporter 25 490 IPR036259 -
Vivi1g00257 505 Gene3D MFS general substrate transporter like domains 20 504 IPR036259 -
Vivi1g00257 505 PANTHER SUGAR TRANSPORTER 24 484 - -
Vivi1g00257 505 CDD MFS_SLC45_SUC 27 481 - -
Vivi1g00257 505 FunFam Sucrose transport protein 21 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00257 Vivi-Chr1 5275088 5277109 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00257 1 505 Sucrose Transporter Gene Family AT1G71890 60.155 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00257 K15378 - gmx:100785359 677.937