Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00255 ATGGAAGAAGGTAATAGCGACCTTCCTTGTCCATCACCCTCACCCTTTCGATCTTCTTCCCTCCTCAAAGACATTTCAAACTTCAAAACCCCTTTCAAAACCCCTAAACGTTCCTCTTTCTCTCTCAACACCCAATCTCCATCATCTCAATACTTCACCGCTTCCAAATCCAAACAAACCACACTCCTCCGTCGCCCTAACAAATCCTCAGCAGCTGCTTCTAGAAAACTCAAAGCATTCCAACTCGAACAGTCTCACTCTTCACGAAACGCACAGATAAAAAAAGAACAATCGCTCAAATCCCTAGCAAAATCCCTAACCGTTTGGCTCAATTTCCTTCTCGAATCACCTGCTTCTTGCGGTTGCGACCTTTCAGTTGCTGGTGTTCAGATCGGAGATGCTTCTCCGGTGGTGACCAAGGGGAAACGTGATAATGTATCGAGGAATTCGGTTGGAGTTGATTCTTTGTGGAGAACTCCCAAACGACAGAGGAAGAATGCTGCATGTTCGTTGCGAGTTGGTAAGGAAATTGTGAATGCTGCGGATTCACAGAGTTCTTCGTTTTTGAGATTAAAGGATTCTCTGAAGGATGTGTGTAGTTTCGATGATTTCAAGCAGAGAATGAGTATTTATTTGAGTCTTGGAACTTGTGAAGATATCTTCCTGGTCATGAATCAAGTTACCAAGACTATTGATGAAGGAAGGCTAAATATGAAGGCACATTGCCCAATAGTAACAGATTTTGGGTTGAAGGAAAAAGCAGTAAAAGTCCTTATGTGTTATAATCCAAGCTGGTTGCGAATTGGACTATATATAATATTTGGCGGGGACTCTTTAGTGTCTAATGGGGATGGAGAGTCTAATCAAGATGCTGTATTTCTAAAAATGGTCCTTGACAAACTATTTTTTACACATGAGGATTTAGCAAAAGCATATGCTTATAACAAGATGGTTGAAGGAGTTTATAGGTCTGGTTACTATGAGAGTTTGGGGAATGTGATTTTGAAGAGAATATTGTTACTTGTGCTTATCCTTGATAAAGCTAAATGTCAATGTTGCCTTCCTATTGAGTATGGTATTGATGGATTGGATGGTGGTTCACCTTTATTATTCAAGGCAGAGTTTTGGATTAAATCAAGTAGTCAAGTGATTCAGGAATTTCTGTCATCTGATGTAATGCGCGGAGAAGGCAATCTTCTAACACACTTGGTTATTTTAGGTTACAAAGTGTCTCACCAACAGGGGCCTCTTGTTGAATACGATTTCCAGGTCAGAGATTTATTCATAGATCTCCAAGACGGACTAAAACTATGTAGAGCTATTCATCTCTTGCAAAACAATTCTTCTATACTCAAGAAAATTGTAGTTCCTTCTGACACCCGTAAGAAAAATTTGGTAAACTGTGGTGTTGCCCTACAATATCTTAGACTAGCTGGGGTCTCATTACTTGATGAAGACGACACAACAATTGCAACAGAAGATATTATTAACGGGGATAAAGAACTTACAATTTCTTTGCTCTGGAACATGTTTGTTCGTTTGCAGCTGCCTTTGCTGGTTGATAAAACAAGTTTAGTTGGGGAAATTTCTAAAATCCGCGGACTTGGCATGAATCTCGCAAGTGATGCAAATTCTAGTTCTCTGGATTTGCTTTTGAAATGGATTCAGACTGTTTGTGACAATTACAACTGTACAGTTGACAGTTTTCATTCCCTTGTTGATGGCAAAGCAATCTGGTGCTTACTTGATTATTATTTCCAGAAGGAACTGCACAGTGTCTGTTCATTAAAGGAAGTTTATGAAAAAGGTGGCAAGACGTCAATCATGTCAGTTAATGAATATTCAGATGCACTGTACAATTTCATATTATCCCAGAAATTGACCATGTTGCTGGGGAATTTTCCTGAGGTACTTCAGATTAGTGATCTACTTCAGCATAATGGCGCTTGCAGTGATCGAAGTGTGGTGATATTGGTTGTTTTCCTGGCAAGCCAATTATTTGTCAAGAAAAAAATGGAACACTTAAATTTTCATAAGCTATTGGGTTATGATTGCGAAAACACAAATCGTAGGAATTTGAGGACTGTACAATGCCATTCAAGTTCTGATTCAGCTCAAAAGCCTTATGCTTCAAATGTGCGTGATGATGAAGATGCCGCAAGAAAATTCAAGGCCATCCAAACTTGGTGGCAAGATATGGCTAATCAAAACAATATTATGCAGCCAGCTGTCTCTATTTTGCAGACATCTAGGGCAACCCAAAGCAACATTGATGTTAGAAGAGAAGATGCTGCAAGAAAAATACAAGCACATATCAGAGGACTGGTTGTACGGCGCAAGTTTATCAAAATGGTAGATGCTGTTATCCTTTTGCAGACTGTTTTCCGAGCTAGGAAGAAAGTAAGGCTGGAGCCGATTTGCATGATATTCACTGCTGGTCCAATCTGTGATTTCTCATATGAAACATTGAAGCAATCCGAAGTATTTGAGAGGTATGCCACGCTTTTCTATCATAGGCATTATTTTTTGAGGTTGAAAAGGTCAGCACAGCTTATCCAGCAAGCAGTGAGGAGTTGGCTCTATTGGAGGTCTGAACAAGGATGTAGATTAAGTCCTGACCCCATGATTACAGACACAGTGACTGCTGCCACTACTGTTCAGAAATTTGTCCGTGGTTGGATGGCACGATCTAGATATATTTGTGAGCTAGATCAAAAAGAAAAAGATTTAATTTTTTCTGAACAGAAACTTATCTCTGATCTTAAAACAAAGGCAGCTGTTACCATTCAGCTTGCTTGGAAAAACTACATAAGCTGCAAGTCTACAAGGAAAGAGCACTTGTTTGCGACTAAAATTCAATCTAATTTCCGTAGGTGGTTAATGAGAAAACAATTTTTAAATCAGATTCATGCTGTCATAAAAATTCAATCATATTTTCGAATGTGGAAATGTGTGAATGCTATTCAGAACTTCAAAGCCTTGTTTAAGGCGGCTATTGTCATTCAATCTTTTTTTCGTGGATGGATTGCTCGGAAGCATGCTTGTGCTCGTAAGAATCAGATTATTGAGATTCAAAGGCATTGCCGCGGTTGGCTTATGAAACGGGATTTCATGTTTCAAAGAGATGCTATAATAAAAATCCAGAGTGTCATTAGAAGTTTGAACTGCCAGAAGTCACTCAATTGTCAGAAAGATGCTGCATTGGAGATCCAGCGCTCCATCAGGGGGCATTTAACACGAAATTGGCTATTAGGTAGTGCTTCCAAGTCACGTGCAGCTGTTACTGGTAGTTGCATTTCAAGACCTGTTGGCTTACGTAGTTTTCAACTTGAAGCATTCATGTGTGCAGTAGTGAAATTGCAAAGGTGGTGGAAGGGTCTCTTGTTGCTTAAACTAATGAATAGATCAGCCGTCACAATCCAGTCTTGTACACGTGGGTGGATAGCCAGACGAAAGGCCACAGTTGAGAAACACCATACTAATGTCATGGAAGAAAATGCCGCAGTGGAGCTCCAACGCTATATTAGGGGACATTTAACTCGAAATTTGATATTAGGTAGTGCTTCTAAGCTGCGTGCAGTTGCGGCTGGATGCATTTCAAAACCAACTTGCTGTTCTAGTTTTCAGTTGAAACTATTCTTGTTTCAAGTAGTGAAATTGCAACGATGGTGGAAGCATCTCTTCTTACATAAATTGAGGATAAGGTCTGTAATCATTATACAGTCTCAAACTCGTGGGTGGCTAACCAGGCGAAGGGCCAATGTTTATAGACATCATATTATTGTCATACAGTCTCAAATTCGTGGATGGGTAACCAGACGAAGGGCCAACTTTTACCGGCATCATATTATTGTCATACAGTCCCACTGGAAAGGTTACATTGCTCGTAAGCAGTCAACAAAACAGCTAATGGATTTGCGCTTGAGACTGCAAGAGTCTTCCAAAAATGTGGATGATAGCAAACGTCTCATAAATAGACTCTTGGCAGCGCTTTCAAAGCTACTAAATATGAAGAGTCTCAGTGACATCCTTCATACTTGTTCAACATTGAATTTGGCGACAGAGCATTCTCAGAGATGCTGTGAAGAACTTGTGGCTGCTGGGGCCATTGAGACCTTGCTACGGCTTATTGGATCACTCAGCCGGAGTATCCCTGATCAAGAGGTTTTAAAGCATGTTTTATCAACTCTCCGAAATCTTGCTCGCTGTCCCCATCTACTGGAAGTGTTGATACAAACACATGGTTCTATACAAACAATCGTCTTGGAGTTAACAAGGAATAATGAGGAGAGCTTCTTCATTGCTTCTGGGCTTTTGAAGAAAATATGCTCAACTCACCAAGGCGTCAACGCCATAATTAACTCCCCTGCCTTACTAAGGAGACTGCGCAGTCTTGTTGAGAAGCTTGCTAGGAAGGTCACTTATAACCCAAAAAGTAATGTTCGGGGTCCTACTCCTAGTCCAGTTGTTACTGCTAAAGAAAACCCAGATAGAAGATTGAAGGAGGCTACTGAAATTCTAAAGCTTCTAACACACGGTTGA 4542 0.4033 MEEGNSDLPCPSPSPFRSSSLLKDISNFKTPFKTPKRSSFSLNTQSPSSQYFTASKSKQTTLLRRPNKSSAAASRKLKAFQLEQSHSSRNAQIKKEQSLKSLAKSLTVWLNFLLESPASCGCDLSVAGVQIGDASPVVTKGKRDNVSRNSVGVDSLWRTPKRQRKNAACSLRVGKEIVNAADSQSSSFLRLKDSLKDVCSFDDFKQRMSIYLSLGTCEDIFLVMNQVTKTIDEGRLNMKAHCPIVTDFGLKEKAVKVLMCYNPSWLRIGLYIIFGGDSLVSNGDGESNQDAVFLKMVLDKLFFTHEDLAKAYAYNKMVEGVYRSGYYESLGNVILKRILLLVLILDKAKCQCCLPIEYGIDGLDGGSPLLFKAEFWIKSSSQVIQEFLSSDVMRGEGNLLTHLVILGYKVSHQQGPLVEYDFQVRDLFIDLQDGLKLCRAIHLLQNNSSILKKIVVPSDTRKKNLVNCGVALQYLRLAGVSLLDEDDTTIATEDIINGDKELTISLLWNMFVRLQLPLLVDKTSLVGEISKIRGLGMNLASDANSSSLDLLLKWIQTVCDNYNCTVDSFHSLVDGKAIWCLLDYYFQKELHSVCSLKEVYEKGGKTSIMSVNEYSDALYNFILSQKLTMLLGNFPEVLQISDLLQHNGACSDRSVVILVVFLASQLFVKKKMEHLNFHKLLGYDCENTNRRNLRTVQCHSSSDSAQKPYASNVRDDEDAARKFKAIQTWWQDMANQNNIMQPAVSILQTSRATQSNIDVRREDAARKIQAHIRGLVVRRKFIKMVDAVILLQTVFRARKKVRLEPICMIFTAGPICDFSYETLKQSEVFERYATLFYHRHYFLRLKRSAQLIQQAVRSWLYWRSEQGCRLSPDPMITDTVTAATTVQKFVRGWMARSRYICELDQKEKDLIFSEQKLISDLKTKAAVTIQLAWKNYISCKSTRKEHLFATKIQSNFRRWLMRKQFLNQIHAVIKIQSYFRMWKCVNAIQNFKALFKAAIVIQSFFRGWIARKHACARKNQIIEIQRHCRGWLMKRDFMFQRDAIIKIQSVIRSLNCQKSLNCQKDAALEIQRSIRGHLTRNWLLGSASKSRAAVTGSCISRPVGLRSFQLEAFMCAVVKLQRWWKGLLLLKLMNRSAVTIQSCTRGWIARRKATVEKHHTNVMEENAAVELQRYIRGHLTRNLILGSASKLRAVAAGCISKPTCCSSFQLKLFLFQVVKLQRWWKHLFLHKLRIRSVIIIQSQTRGWLTRRRANVYRHHIIVIQSQIRGWVTRRRANFYRHHIIVIQSHWKGYIARKQSTKQLMDLRLRLQESSKNVDDSKRLINRLLAALSKLLNMKSLSDILHTCSTLNLATEHSQRCCEELVAAGAIETLLRLIGSLSRSIPDQEVLKHVLSTLRNLARCPHLLEVLIQTHGSIQTIVLELTRNNEESFFIASGLLKKICSTHQGVNAIINSPALLRRLRSLVEKLARKVTYNPKSNVRGPTPSPVVTAKENPDRRLKEATEILKLLTHG 1513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00255 1513 Gene3D - 542 667 IPR036872 -
Vivi1g00255 1513 SUPERFAMILY ARM repeat 1325 1468 IPR016024 -
Vivi1g00255 1513 ProSiteProfiles IQ motif profile. 1017 1046 IPR000048 GO:0005515
Vivi1g00255 1513 MobiDBLite consensus disorder prediction 29 55 - -
Vivi1g00255 1513 MobiDBLite consensus disorder prediction 1 20 - -
Vivi1g00255 1513 Coils Coil 1296 1316 - -
Vivi1g00255 1513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 924 994 IPR027417 -
Vivi1g00255 1513 ProSiteProfiles IQ motif profile. 1279 1307 IPR000048 GO:0005515
Vivi1g00255 1513 ProSiteProfiles IQ motif profile. 996 1023 IPR000048 GO:0005515
Vivi1g00255 1513 ProSiteProfiles IQ motif profile. 881 908 IPR000048 GO:0005515
Vivi1g00255 1513 ProSiteProfiles IQ motif profile. 945 974 IPR000048 GO:0005515
Vivi1g00255 1513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 990 1047 IPR027417 -
Vivi1g00255 1513 Gene3D - 410 515 IPR036872 -
Vivi1g00255 1513 ProSiteProfiles IQ motif profile. 1164 1193 IPR000048 GO:0005515
Vivi1g00255 1513 Gene3D - 1041 1095 - -
Vivi1g00255 1513 Gene3D - 1131 1196 - -
Vivi1g00255 1513 Gene3D - 947 993 - -
Vivi1g00255 1513 Gene3D - 994 1040 - -
Vivi1g00255 1513 Gene3D - 880 946 - -
Vivi1g00255 1513 Gene3D - 760 804 - -
Vivi1g00255 1513 Gene3D - 1256 1304 - -
Vivi1g00255 1513 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1368 1415 IPR000225 GO:0005515
Vivi1g00255 1513 ProSiteProfiles IQ motif profile. 761 788 IPR000048 GO:0005515
Vivi1g00255 1513 ProSiteProfiles IQ motif profile. 1133 1161 IPR000048 GO:0005515
Vivi1g00255 1513 Pfam Armadillo/beta-catenin-like repeat 1358 1402 IPR000225 GO:0005515
Vivi1g00255 1513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1218 1303 IPR027417 -
Vivi1g00255 1513 SMART arm_5 1357 1402 IPR000225 GO:0005515
Vivi1g00255 1513 CDD CH_ASPM_rpt1 399 510 - -
Vivi1g00255 1513 Gene3D - 1305 1487 IPR011989 -
Vivi1g00255 1513 PANTHER UNCHARACTERIZED 880 1035 - -
Vivi1g00255 1513 SUPERFAMILY Calponin-homology domain, CH-domain 340 588 IPR036872 -
Vivi1g00255 1513 ProSiteProfiles IQ motif profile. 1233 1260 IPR000048 GO:0005515
Vivi1g00255 1513 ProSiteProfiles IQ motif profile. 1256 1283 IPR000048 GO:0005515
Vivi1g00255 1513 SMART iq_5 760 782 IPR000048 GO:0005515
Vivi1g00255 1513 SMART iq_5 1132 1154 IPR000048 GO:0005515
Vivi1g00255 1513 SMART iq_5 967 989 IPR000048 GO:0005515
Vivi1g00255 1513 SMART iq_5 783 802 IPR000048 GO:0005515
Vivi1g00255 1513 SMART iq_5 1232 1254 IPR000048 GO:0005515
Vivi1g00255 1513 SMART iq_5 1062 1084 IPR000048 GO:0005515
Vivi1g00255 1513 SMART iq_5 1016 1038 IPR000048 GO:0005515
Vivi1g00255 1513 SMART iq_5 1163 1185 IPR000048 GO:0005515
Vivi1g00255 1513 SMART iq_5 878 900 IPR000048 GO:0005515
Vivi1g00255 1513 SMART iq_5 993 1015 IPR000048 GO:0005515
Vivi1g00255 1513 SMART iq_5 944 966 IPR000048 GO:0005515
Vivi1g00255 1513 SMART iq_5 1279 1300 IPR000048 GO:0005515
Vivi1g00255 1513 SMART iq_5 1255 1277 IPR000048 GO:0005515
Vivi1g00255 1513 ProSiteProfiles Calponin homology (CH) domain profile. 393 515 IPR001715 GO:0005515
Vivi1g00255 1513 ProSiteProfiles IQ motif profile. 1063 1092 IPR000048 GO:0005515
Vivi1g00255 1513 Pfam Calponin homology (CH) domain 423 512 IPR001715 GO:0005515
Vivi1g00255 1513 Pfam IQ calmodulin-binding motif 1282 1298 IPR000048 GO:0005515
Vivi1g00255 1513 Pfam IQ calmodulin-binding motif 763 781 IPR000048 GO:0005515
Vivi1g00255 1513 Pfam IQ calmodulin-binding motif 1166 1182 IPR000048 GO:0005515
Vivi1g00255 1513 Pfam IQ calmodulin-binding motif 1021 1037 IPR000048 GO:0005515
Vivi1g00255 1513 Pfam IQ calmodulin-binding motif 949 965 IPR000048 GO:0005515
Vivi1g00255 1513 Pfam IQ calmodulin-binding motif 1259 1275 IPR000048 GO:0005515
Vivi1g00255 1513 Pfam IQ calmodulin-binding motif 1065 1082 IPR000048 GO:0005515
Vivi1g00255 1513 Pfam IQ calmodulin-binding motif 1135 1152 IPR000048 GO:0005515
Vivi1g00255 1513 Pfam IQ calmodulin-binding motif 996 1013 IPR000048 GO:0005515
Vivi1g00255 1513 Pfam IQ calmodulin-binding motif 1235 1252 IPR000048 GO:0005515
Vivi1g00255 1513 Pfam IQ calmodulin-binding motif 882 899 IPR000048 GO:0005515
Vivi1g00255 1513 Pfam IQ calmodulin-binding motif 970 984 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00255 Vivi-Chr1 5183713 5194281 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00255 908 1069 Myosins gene family AT1G04160 28.902 1.13e-06 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00255 K16743 - gmx:100817636 1548.49