Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00218 ATGGATGAGGCTGCAATCAAGCCAACAATTGACATTATTGTATGTGCTTCCATGAACAATCATCATACTAGTGCTAAAAGCAGTGATGATTCCATTTCCATTTCAAACCCAAAAACCAAGCCATCATCACATTCAGAGTCACCACCATTCTTAACTAAGATCCATGCAGGCTACTTTTTCATCTCTCTTTCCTTTGGTGCTCAAGCTTTGCTATGGAAGAGTTTAAGTGAGCATAACAATGAATCACAAACTCTATGGCATGGTTTTAACTTGATGCCTTCTGTTGCTTATCTACTACTTTGGTGTCTTGCAGTAGTCATTGCAACCATCTTATCTTTTCTCTATATGCTCAAGTGCATCTTGCACTTTAATGCAGTGAAGGATGAGTTTTCACATCATATTGGAGTTAACTACATGTATACTCCTTGGATTTCTTATCTTCTCATGCTTCAATCGTCTCCGCCTTCGATTGTTCCGAGGACTTGTTACTACGAGTTTCTTTGTCTGTCATTTTCTTTTGTTATATTCCTTCTTGATGTAAAACTATTCGGGCAATGGTTCACAACTAAAAAGAGGTTTCTGTCAGTGGTAGCAAACCCTGTTAACCTTGTTTCTGTTATAGGCAACTTGGTCGCGGCTCAAGTAGCGACAGAAATCGGTTGGAACGAGTGTGCGCTTTCAATGTTTTCGCTAGGAATGGTACATTATTTGGTTCTATTCGTGACGCTGTATCAGCGTCTGACGAGTAATAACCAGTTTCCTATAGTTCTAAGGCCAGCTTATTTCTTGTATTTTGCTGCTCCAAGCATGGCAAGTTTAGCTTGGAAATCCATCTCAGGTTCTTTTCTCATCTCATCAAAGATGCTGTTCTTTCTGTCTTTGTTCCTTTTTCTTTCTCAGGCTTGCAGGCCAGGACTGTTCAAGAAAACTATAAAAAGGTTAAACGTTACATGGTGGATCTACTCATTCCCTTTAACATTCCTTGGTCTAGCTTGTGCTGAATATGCTCATGAGGTGAAAAGTAGCATGGCTTCTGGTTTAATGCTTCTGATATGTATTGTGTCTGTTCTGGTTTTTGTTTTTCTGATGCTATCAACTGTACTCAAAATTGAGAAGCTGATCCATAAAAAAACACCTAGCAAATGA 1146 0.3909 MDEAAIKPTIDIIVCASMNNHHTSAKSSDDSISISNPKTKPSSHSESPPFLTKIHAGYFFISLSFGAQALLWKSLSEHNNESQTLWHGFNLMPSVAYLLLWCLAVVIATILSFLYMLKCILHFNAVKDEFSHHIGVNYMYTPWISYLLMLQSSPPSIVPRTCYYEFLCLSFSFVIFLLDVKLFGQWFTTKKRFLSVVANPVNLVSVIGNLVAAQVATEIGWNECALSMFSLGMVHYLVLFVTLYQRLTSNNQFPIVLRPAYFLYFAAPSMASLAWKSISGSFLISSKMLFFLSLFLFLSQACRPGLFKKTIKRLNVTWWIYSFPLTFLGLACAEYAHEVKSSMASGLMLLICIVSVLVFVFLMLSTVLKIEKLIHKKTPSK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00218 381 Gene3D - 50 374 IPR038665 -
Vivi1g00218 381 CDD TDT_SLAC1_like 55 366 - -
Vivi1g00218 381 PANTHER S-TYPE ANION CHANNEL SLAH3 44 370 IPR030183 GO:0006873|GO:0008308|GO:0016020
Vivi1g00218 381 MobiDBLite consensus disorder prediction 23 47 - -
Vivi1g00218 381 FunFam S-type anion channel SLAH1 48 374 - -
Vivi1g00218 381 Pfam Voltage-dependent anion channel 54 367 IPR004695 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00218 Vivi-Chr1 4262379 4265221 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00218 K26672 - gmx:100779095 521.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00218 1 4262379 4265221 Vivi1g00218 1 4262379 4265221 ECH
Vivi2g06247 2 197104444 197105744 Vivi1g00218 1 4262379 4265221 ECH