Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00202 ATGCTAGTGCCCATTACAGTAGCTTTCTTTTCAATATTCTTCTTTTACTATCTTTCTTATAGAAATTCTAAAGTTTCTAATACCAACGAAGTTCCTATAGTTCAAGGGGCATGGCCAATAATTGGTCACCTCCCACTTTTGAGGGCTTCAAAAGGAATACCTCATAAAACCTTAGGTCATTTGGCAACCAAATATGGACCCTTGTTTTCCATTAAGCTTGGTTCCAAACGTGCTTTGGTATTAAGTAATTGGGAAATGGCTAAAGAATGTTTCACCAAGATTGACTTGGCAGTTTCTAGTCGCCCAATGCTTGAATCAACTCAACATATGGCTTACAATGGAGCCATGTTTACTTTAGCGCCCTATGGTCCTTTTTGGCGCCAAGCGCGTAAAATCACAACTTTAGAAATCCTCAGTCACCGTCGTTTGGAGCAACTTCAACATTTTCGTGTCATGGAAGTTCGACGTTCGATTAAAGATCTCTATAATGATTCTGATCATCAAGATTTCATGGATGTGATGCTTTCATTGCTTGATGGAAAAACAGTTGAAGGATATGATTCTGATACTACAATCAAAGGCACAATGTTGGCATTGATTGCGGGAGGAGTTGACACAACTTGTGTAACTCTTACATTGTTACTGAAAAATCCTCATGTAATGAAAAAAGCAAAAGAAGAACTTAACATTCAAGTTGGAAAAGAGAGGCGTGTAGAAGTATCGGATATAGAAAATTTGGTGTACCTTCAAAGTATAGTTAAAGAAACACTAAGATTATATCCACCGGTTCCTCTCTCGGTGCCGCGCGAATTCTCAGAGGATTGCAATTTAGGTGGTTATGATGTCGAAAAAGGAACTCGACTTATATTGAATCTTTGGAAAATTCACACTGATCCTAAGATTTGGTTAGATCCGTTAGAGTTTAAACCAGAACGGTTTCGTAGCACTCATAAAGAAATTGATGTTAAGGGTCATAACTTTGAGTTATTACCATTTGGAAGTGGTAGAAGGGTTTGTCCTGGAATATCTTTGGGCCTTGAAATGGTGAGTTTAACCTTAGCTAGTTTTTTGCATTCCTTTGAAATCTCAAGTCCTTCATGTGATTCTATTGATATGAGTGAAGCCTTTGGAGTAACCAACACCAAAGCAACTCCTCTTGAGATTCTTATTAAGCCTTGTTTATCTGTTAGTTATTATGAAAATATGTGA 1209 0.3755 MLVPITVAFFSIFFFYYLSYRNSKVSNTNEVPIVQGAWPIIGHLPLLRASKGIPHKTLGHLATKYGPLFSIKLGSKRALVLSNWEMAKECFTKIDLAVSSRPMLESTQHMAYNGAMFTLAPYGPFWRQARKITTLEILSHRRLEQLQHFRVMEVRRSIKDLYNDSDHQDFMDVMLSLLDGKTVEGYDSDTTIKGTMLALIAGGVDTTCVTLTLLLKNPHVMKKAKEELNIQVGKERRVEVSDIENLVYLQSIVKETLRLYPPVPLSVPREFSEDCNLGGYDVEKGTRLILNLWKIHTDPKIWLDPLEFKPERFRSTHKEIDVKGHNFELLPFGSGRRVCPGISLGLEMVSLTLASFLHSFEISSPSCDSIDMSEAFGVTNTKATPLEILIKPCLSVSYYENM 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00202 402 PRINTS P450 superfamily signature 330 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g00202 402 PRINTS P450 superfamily signature 216 229 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g00202 402 PRINTS P450 superfamily signature 251 262 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g00202 402 SUPERFAMILY Cytochrome P450 37 392 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g00202 402 PANTHER CYTOCHROME P450 82C3-RELATED 165 399 - -
Vivi1g00202 402 FunFam Cytochrome P450 82C4 163 391 - -
Vivi1g00202 402 Gene3D Cytochrome P450 25 164 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g00202 402 Pfam Cytochrome P450 36 161 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g00202 402 Pfam Cytochrome P450 146 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi1g00202 402 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 332 341 IPR017972 GO:0005506|GO:0016705
Vivi1g00202 402 Gene3D Cytochrome P450 165 395 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00202 Vivi-Chr1 3893774 3895237 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00202 163 392 Cytochrome P450 AT4G31940 56.540 7.54e-82 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00202 - - vvo:131645273 793.112