Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00158 ATGCAATCGTCTCGGGAAGGACCGAATTCAGCTGGTCTCAATTTCTATCACCAAACTGGTCAGGGAATTTACCTACAAGGCAATCTATGTGTTGATAGACATGGTAGCAGCAGCCAGGGAACTGGTTTTTCTTTCGAAACTAGCAAGGAGCAATGCTTCCCCCTAGAGTCATATCCAGAAATTGTTGCTTTCATGGATTGTGATTCCCCTTCCTATGCCAGTGTATCATCTAACAAGAGTCCATTTTCTCCGCAAGATTCTCAGTCTTGTTATTCAGATCACCACCAGTCTTCTGACAACACATATGGATCGCCGATAAGTGGGATGTCTAGTGTTGATGAAGGCAATGATTTGAAACACAAGCTTAGAGAATTGGAGAATTCGTTATTGGGGCCTGATGATTTCGATATTGTTGACAGTTATGGAAGCAGCATGGAGGCTAGTCTCCACGGTGCATGTCCTTCACCTAAATATAATTGGGATCTGATTGCCGAAAATATTCCAAAGCTTGACTTGAAAGAAGTCCTCTTGCTATGTGCACAAGCTGTGTCTGATGGTGATATTCCAACGGCAAAAGGCTGGATGGATAATGTGTTGGTGAAGATGGTGTCGGTAGCCGGAGAACCAATCCAGAGGTTAAGTGCTTACTTGTTGGAAGGGCTTAGAGCAAGGTTGGAATCGTCCGGAATCTTGATCTACAAGGCCTTGAAATGTGAACAACCAACAAGCAAAGAGCTAATGAGTTATATGCACACACTGTATCAGATTTGCCCATATTTTAAATTTGCATACATATCTGCAAATGCTGTTATTCATGAAACAATGGCAAATGAATCCCGGATTCATATAATCGATTTCCAAATTGCACAGGGCACGCAGTGGCATTTACTTATTCAAGCTCTTGCACACAGACCTGGCGGACCCCCTTTTATTCGTGTAACAGGTGTTGATGATTCCCAATCATTTCATGCTCGCGGTGGAGGACTTCAGATTGTAGGGCAACGGCTTTCAGATTTCGCCAGATCTTGCGGAGTTCCGTTTGAGTTCCATACTGCTGCAATGTCTGGTTGCGAAGTTCATAAGGAGAATCTTAGCATTAGGCCCGGGGAAGCCCTTGCTGTAAATTTTCCTTATATTTTGCACCACATGCCTGACGAGAGTGTGAGCATAGAGAATCATAGAGACAGATTGCTGAGATTGGTTAAAAGCTTGTCTCCAAAGGTTGTTACCCTCGTTGAGCAAGAATCCAACACCAATACTTCTCCTTTCTTTCATAGGTTTGTCGAGACAATGGATTATTACACAGCTATGTTTGAATCAATCGATGTTGCTTGCGCCAAAGACGATAAGAAGCGGATTAGTACCGAGCAGAACTGCGTTGCACGGGACATCGTCAACATGATAGCCTGCGAGGGGATTGAGAGGGTTGAGAGGCATGAACTTTTTGGAAAGTGGAGGATGAGATTTTCCATGGCTGGATTTAAACAATGCCAATTGAGTTCTTCAGTGATGCATTCTGTCGAAAATATGTTGAAGGACTTCAATCAAAACTACAGACTAGAACATAGAGACGGCGCTCTTTATCTTAACTGGATGAAGAGAGCTATGGCCACTTCTTCTGCTTGGAGGTGA 1632 0.435 MQSSREGPNSAGLNFYHQTGQGIYLQGNLCVDRHGSSSQGTGFSFETSKEQCFPLESYPEIVAFMDCDSPSYASVSSNKSPFSPQDSQSCYSDHHQSSDNTYGSPISGMSSVDEGNDLKHKLRELENSLLGPDDFDIVDSYGSSMEASLHGACPSPKYNWDLIAENIPKLDLKEVLLLCAQAVSDGDIPTAKGWMDNVLVKMVSVAGEPIQRLSAYLLEGLRARLESSGILIYKALKCEQPTSKELMSYMHTLYQICPYFKFAYISANAVIHETMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPFIRVTGVDDSQSFHARGGGLQIVGQRLSDFARSCGVPFEFHTAAMSGCEVHKENLSIRPGEALAVNFPYILHHMPDESVSIENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFFHRFVETMDYYTAMFESIDVACAKDDKKRISTEQNCVARDIVNMIACEGIERVERHELFGKWRMRFSMAGFKQCQLSSSVMHSVENMLKDFNQNYRLEHRDGALYLNWMKRAMATSSAWR 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00158 543 ProSiteProfiles GRAS family profile. 163 543 IPR005202 -
Vivi1g00158 543 Pfam GRAS domain family 172 543 IPR005202 -
Vivi1g00158 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 116 533 IPR005202 -
Vivi1g00158 543 MobiDBLite consensus disorder prediction 75 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00158 Vivi-Chr1 2801738 2804696 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00158 1 543 GRAS Transcription Factor Family AT4G17230 57.952 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi1g00158 GRAS 2.5e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00158 - - gmx:100776109 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00158 1 2801738 2804696 Vivi1g00158 1 2801738 2804696 ECH
Vivi1g00158 1 2801738 2804696 Vivi1g00158 1 2801738 2804696 PCT