Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00091 ATGTTCAACAACAACTACTCCACCACCGAGATAGAGGAGGAAGAAGACACCATCATCAACCACCACCAGTACCTTGACACAATCGACAATGAAATTGAAGAAGAACAAGAAGACTCCATTTATGTTGCAGTTGGTAAGAGCGATACAAGCATGGAAGCTCTCTCATGGACACTCAATAACCTTACCACTCATTCCACCATGCTCTATCTCATTCATGTATTCCCAGAAATCAAACACATTCCACATCCATTGGGAGTAGGAATGATTGCTAGGAATCAAGTTAGTGCTGAGCAGGTAGAAATTTACATGGAGCAAGAAAGAAACAAGAGAAGACAACTCCTTCACAAGTTCATCCAATCTTGCTCTCTTTCCAAAGTTAAGGTTGATACCATCCTAATAGAAAGTGATTTCGTTGCAAAAGCCATCCTTGACCTAATTCCTATTCTTCAAATATCAAATTTAGTCATCGGCGCCAACAAGTTCCATCAAAGAAAAGCGAGATCAAAGAAAGGAAATGGCGTGGCTGATCAGGTGGTACAGAATGCACCAGAAAATTGTAAGGTTAGAATTATCTGTGAAGGTAAGGAAGTAAATGATGAGCAAATGATGATGAAGACACCTTCTCCTAAGATGATTGCCACTGCCAACTCTGCTAATAATGTGAACAACACAAAAGAAAATGATTCAGTTTTATGTGTTTGTTTCAAACCAAAGTTTAAATGA 723 0.39 MFNNNYSTTEIEEEEDTIINHHQYLDTIDNEIEEEQEDSIYVAVGKSDTSMEALSWTLNNLTTHSTMLYLIHVFPEIKHIPHPLGVGMIARNQVSAEQVEIYMEQERNKRRQLLHKFIQSCSLSKVKVDTILIESDFVAKAILDLIPILQISNLVIGANKFHQRKARSKKGNGVADQVVQNAPENCKVRIICEGKEVNDEQMMMKTPSPKMIATANSANNVNNTKENDSVLCVCFKPKFK 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00091 240 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 3 240 - -
Vivi1g00091 240 Pfam Universal stress protein family 39 183 IPR006016 -
Vivi1g00091 240 Gene3D HUPs 27 203 IPR014729 -
Vivi1g00091 240 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 39 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00091 Vivi-Chr1 1762077 1763384 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00091 39 195 Plant U-box Gene Family AT5G57035 31.447 1.27e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00091 - - lja:Lj4g3v0097300.1 296.589