Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00088 ATGAATGAAAATATTGATGCCGATTATAAGTTCTTACACTACTTCGATGAAGATATCGGCACACATTGTGCTTGCCGTTCCAATAGCAAAATAGAAGAAGAAGAAGAAAAAGATGATGGTGTATATTCAAAAGAGTTATTTGAGATGAATCTAAAGAAGGAACCATTAGATACTATAAGAGAAGAAGATTGCGAGAGCAGTGTTTTCTCTATTGATATCCACAACGATAGGTTATATGATGTTGTTTATGTGGCAGTTGGAGAAACTGATTCAAGCATGGAAGCACTTTCATGGACTTTAAAGCACTTAGTGAACCCTAATTCTACTATTGTTTCTCTTGTACATGTTTTCCCTCAAGCCAAGCGAATTCCAACTTCACTGGGAAAAATTCCAAGGAGATATGTGAGTCAAGAACAAGTTAACAACTACTTGAGCCAAGAGAAAAGGAAGAGGAGAATACTCCTTCAAAAGTTCATTGACATGTGTACTGGCTCAAAAGTTAAGGTGGAGATGTTGCTTATTGAGGGTGACAACGTTGGTAAAGCCATTGTAGATCTTGTGAAGAATCTGAATATAAGAAAATTGGTGATTGGAATTACACAATCTAATCTAAGAAAACATGAGTCAAGAAGACATGATTCTACCGCAGAGATGGTGTTGAAAAGTGTAGAAGAAAGATGTGATATTAAAATCATATGTGAAGGAAGAGAAGTGAATGATTTGATGATTAATGGATATACTTTAGAGCATGATGGAGTAGATGATCTTGTTCCAATCAAGCAACCGAAACCATTTTGGTTATCAGATTAG 810 0.3556 MNENIDADYKFLHYFDEDIGTHCACRSNSKIEEEEEKDDGVYSKELFEMNLKKEPLDTIREEDCESSVFSIDIHNDRLYDVVYVAVGETDSSMEALSWTLKHLVNPNSTIVSLVHVFPQAKRIPTSLGKIPRRYVSQEQVNNYLSQEKRKRRILLQKFIDMCTGSKVKVEMLLIEGDNVGKAIVDLVKNLNIRKLVIGITQSNLRKHESRRHDSTAEMVLKSVEERCDIKIICEGREVNDLMINGYTLEHDGVDDLVPIKQPKPFWLSD 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00088 269 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 82 221 - -
Vivi1g00088 269 Pfam Universal stress protein family 79 219 IPR006016 -
Vivi1g00088 269 Gene3D HUPs 78 227 IPR014729 -
Vivi1g00088 269 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 26 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00088 Vivi-Chr1 1717761 1718827 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00088 82 235 U-box Gene Family AT2G45910 28.931 4.85e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00088 - - tpra:123908796 304.293