Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00085 ATGTCTCGTGTGTGCTTACACTGTTACGTTGATGCATCCGATGAAGACAATACAAGTTGTGGTTGCGGTTTGATTGGTTTCAAGAAAAACCAAGTGTTTGACTTTGATTACAGTTTCAGTAGCGAAATAGAAGAAGAAGATGATTTGTTTGAGATAAATCTGAAGAAGGGAGAACCATTGGATTCAATAAAAGAAGAAGAAGATTATGAAAGAAGTACTGTGTTCTCTCTTGATATCCACAAAGATAAGTTATCTGATTCTGATGTTGTTTATGTGGCTGTTGGAGAAAATGGTTCAAGCATGGAAGCACTTTCGTGGACCTTAAAACACTTAGTCAAGCCTAATTCTACTATTGTTTCTCTTGTACATGTTTTCCCTAGAGTCAAACAAATTCCAACTCCAATGGGAAAAATTCCAAGGAGTCGTGTGAATCAAGAATATGTTAACATCTACATGACCCAAGAGAAAAGCAAGAGAAAATTACTCCTTCAAAAGTTCATTGACATGTGTACTGATTCAAAAGTTAAGGTGGAGATTTTGCTTATTGAGGGTGACAAAGTTGCTAAAGCCATTGTAGAGCTTGTTAAGAATTTAAATATATTGAAATTGGTGATTGGAACTACACAATCTTATCTAAGAAAACATGCGTCAAGAAGGCAAAATTCTACTGCGGAGATGGTGTTAAAAAGTGTAGAAGAAAATTGTGATGTTAAAATCATATGTGAAGGAAGAGAAGTGATTGATGAAATGATTAATGGGTGCAGTTCACAGCATGATGAAGTAGATGGTTTTGTTCCAGTCAAGCGTTTTGTTCCCAATGCGTTTGGGATATTTAGGTTCAGACATAGTTCATAA 855 0.3556 MSRVCLHCYVDASDEDNTSCGCGLIGFKKNQVFDFDYSFSSEIEEEDDLFEINLKKGEPLDSIKEEEDYERSTVFSLDIHKDKLSDSDVVYVAVGENGSSMEALSWTLKHLVKPNSTIVSLVHVFPRVKQIPTPMGKIPRSRVNQEYVNIYMTQEKSKRKLLLQKFIDMCTDSKVKVEILLIEGDKVAKAIVELVKNLNILKLVIGTTQSYLRKHASRRQNSTAEMVLKSVEENCDVKIICEGREVIDEMINGCSSQHDEVDGFVPVKRFVPNAFGIFRFRHSS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00085 284 Gene3D HUPs 83 244 IPR014729 -
Vivi1g00085 284 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 37 256 - -
Vivi1g00085 284 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 92 237 - -
Vivi1g00085 284 Pfam Universal stress protein family 90 231 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00085 Vivi-Chr1 1677279 1678928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00085 87 216 U-box Gene Family AT4G25160 31.061 2.29e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00085 - - tpra:123908796 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g00085 1 1677279 1678928 Vivi1g00085 1 1677279 1678928 PCT