LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi1g00084	ATGGCAATGAATGGAAATATTGATGGCGATGATGAGTTTTTACACTACTTCGATGAAGACATTGGCACACGTTGTGTTTGCGGTTTCCGTAGCAAAATAGAACTAGAAGAAGAAGATGATGGTGTGAATTCAGAAGATCTATTTGAGATGAATCTAAAGAAGGAACCATTAGGTACAATAAGAGAAGAAGATTGCGAGAGCAGTGTTTTCTCTATTGATATCCATAAGGATAGGTTATATGATGTTGTTTATGTGGCTGTTGGAGAAAATGGTTCAAGCATGGAAGCACTTTCATGGACCTTAAAGCACTTAGTAAACCCTAATTCTACTATTGTTTCTCTTATACATGTTTTCCCTCAAGTCAAGCGAATTCCAACTTCACTGGGAAAAATTCCAAGGAAATATGTGAGTCAAGAACAAGTTAACAACTACTTGAGCCAAGAGAAAAGGAAAAGGAGAATACTCCTTCAGAAGTTCATTGACATGTGTACTGGCTCAAAAGTTAAGGTAGAGATGTTGCTTATTGAGAATGACAACGTTGGTAAAGCCATTGTAGATCTTGTGAAGAATCTAAATATAAGAAAATTGGTGATTGGAATTACACAATCTAATCTAAGAAAACATGAGTCAAGAAGACATGATTCTACCGCAAAGATGGTGTTAAAAAGTGTAGAAGACAGATGTGATATTAAAATCATATGTGAAGGAAGAGAAGTGATTGATCAAATGATTAATGGATGTACTTCATCAGAGCATGATGCAGTAGATGGTTATGTTCCGATCAAGCAATCCATGCCCAAACCATTTTGGTTATATACGTCTAGATATGATTGGAATTGGAACTATACAATCTAG	855	0.3567	MAMNGNIDGDDEFLHYFDEDIGTRCVCGFRSKIELEEEDDGVNSEDLFEMNLKKEPLGTIREEDCESSVFSIDIHKDRLYDVVYVAVGENGSSMEALSWTLKHLVNPNSTIVSLIHVFPQVKRIPTSLGKIPRKYVSQEQVNNYLSQEKRKRRILLQKFIDMCTGSKVKVEMLLIENDNVGKAIVDLVKNLNIRKLVIGITQSNLRKHESRRHDSTAKMVLKSVEDRCDIKIICEGREVIDQMINGCTSSEHDAVDGYVPIKQSMPKPFWLYTSRYDWNWNYTI	284

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi1g00084	284	Gene3D	HUPs	78	228	IPR014729	-
	Vivi1g00084	284	PANTHER	U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE	36	251	-	-
	Vivi1g00084	284	Pfam	Universal stress protein family	80	223	IPR006016	-
	Vivi1g00084	284	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	83	204	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi1g00084	Vivi-Chr1	1669236	1670548	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi1g00084	78	236	U-box Gene Family	AT2G45910	30.303	2.38e-13	68.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi1g00084	-		-	tpra:123908796	315.849