LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi1g00060	ATGCCGCTGAATCGTGATATTGATGGTGATGATGATTGCTTGCACTACTACGATGAAGACATCGGCATAAGATGTGGTTGCGGTTTGATTGGGTTCAAGAAAAACCAAGTGTTTGATTGCAGTTTCGATATCGAAATAGAAGAAGATGATGATGAATTGTTTGAGATAAATCTGAAGAAGGAAGAACCATTGGATTCAATAAAAGAAGAAGAAGATTATGAAAGCAGTACTGTGTTCTCTCTTGATATCCAAAACCATAAGTTATCTGATTCTGATGTTGTTTATGTGGCAATTGGAGAAAATGGTTCAAGCATGGAAGCACTTTCATGGACCTTAAAGCACTTAGTGAACCCTAATTCTACTATTGTTTCTCTTATACATGTTTTTCCTCAAGTCAAGCGAATTCCAACTCCATTGGGAAAAATTCCGAGGAGTCGTGTGAATCAAGAACATGTTAACATCTACTTGACCCAAGTGAAAAGCAAGAGAAAAAAACTCATTCAGAAGTTCATTGACTTGTGTACTGAGTCAAAAGTTAAGGTGGAGATTTTGCTTATTGAGGGTGACAACGTTGGTGAAGCGGTTGTAGAGCTTGTTAAGAATCTAAATATAAGAAAATTGGTGATTGGAACTGCACAATCTAATCTAAGAAAACATGTGTCAAGAAAGCAAAATTCTACTGCAGAGATGGTGTTAAAAAGTGTAGAAGAAAGATGTGATGTTAAAATCATATGTGAAGGAAGAGAGGTGATTGATGAGATGATTAATGGGTGCAGTTCACAGCATGATGAAGTAGATGGTTTTGTTCCAATCAAACGTTTGATGCCCAGTCCGTTTTGGTTATTTAGGTCTAGATGA	858	0.3671	MPLNRDIDGDDDCLHYYDEDIGIRCGCGLIGFKKNQVFDCSFDIEIEEDDDELFEINLKKEEPLDSIKEEEDYESSTVFSLDIQNHKLSDSDVVYVAIGENGSSMEALSWTLKHLVNPNSTIVSLIHVFPQVKRIPTPLGKIPRSRVNQEHVNIYLTQVKSKRKKLIQKFIDLCTESKVKVEILLIEGDNVGEAVVELVKNLNIRKLVIGTAQSNLRKHVSRKQNSTAEMVLKSVEERCDVKIICEGREVIDEMINGCSSQHDEVDGFVPIKRLMPSPFWLFRSR	285

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi1g00060	285	Gene3D	HUPs	88	248	IPR014729	-
	Vivi1g00060	285	Pfam	Universal stress protein family	94	234	IPR006016	-
	Vivi1g00060	285	PANTHER	U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE	42	260	-	-
	Vivi1g00060	285	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	96	241	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi1g00060	Vivi-Chr1	1337246	1338684	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi1g00060	91	248	U-box Gene Family	AT4G25160	27.673	4.34e-15	73.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi1g00060	-		-	tpra:123908796	364.77