Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00056 ATGGCAAGCGCAAGCGTAGAGAATAATACTAATCTCACTCTTTATGGATATTGGAGAAGTTCATGTTCCTTCCGTGCCCGAATTGCTCTCAACCTCAAAGGTCTCAAATATGATTACAAACCAGTTAATCTCTTGAAGGGAGAACAATCTCACCCTGAGTTTCTCCAACTCAACCCTGTTGGTTTTGTTCCCGTTCTCGTTGATGGTTCTGCTGTTATTTTCGACTCTTTCGCCATTATCATGTATTTGGAGGACAAGTATCCTCAACATCCTTTGCTTCCTACTGATATTCACAAAAGAGCAATCAATTTCCAGGCTGTTAGTATTGTTTCTTCGTCAATTCAACCTCTTCAAAACTTAAACCTTCTGAAGTACATCGAGACAAATGTTGGCCCGGATGAAACACTTCCATGGGTCCAGAGTGTAATTAGAAAAGGCTTCACAGCACTTGAAAAGCTATTGAAAGAACACACTGGGAGGTATGCTACTGGTGACCAAGTTTCTATGGCGGATGTATTTTTAGCACCTCAGATACATGCTGCAACTAATAAATTCAACATTGACATGAATGAGTTCCCTATTCTCTCGAGATTACATGAGACATATTATGATATTCCAGCATTCCGGGAGGCTTTGCCAGAGAATCAGCCAGACGCTGTAGGCTAG 666 0.4129 MASASVENNTNLTLYGYWRSSCSFRARIALNLKGLKYDYKPVNLLKGEQSHPEFLQLNPVGFVPVLVDGSAVIFDSFAIIMYLEDKYPQHPLLPTDIHKRAINFQAVSIVSSSIQPLQNLNLLKYIETNVGPDETLPWVQSVIRKGFTALEKLLKEHTGRYATGDQVSMADVFLAPQIHAATNKFNIDMNEFPILSRLHETYYDIPAFREALPENQPDAVG 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00056 221 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 96 221 IPR010987 -
Vivi1g00056 221 SFLD Main (cytGST) 12 200 - -
Vivi1g00056 221 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 10 91 IPR004045 -
Vivi1g00056 221 FunFam Maleylacetoacetate isomerase 95 221 - -
Vivi1g00056 221 CDD GST_C_Zeta 98 216 IPR034330 -
Vivi1g00056 221 Gene3D Glutaredoxin 9 94 - -
Vivi1g00056 221 Pfam Glutathione S-transferase, N-terminal domain 12 84 IPR004045 -
Vivi1g00056 221 NCBIfam maleylacetoacetate isomerase 13 219 IPR005955 GO:0003824|GO:0005737|GO:0009072
Vivi1g00056 221 CDD GST_N_Zeta 12 84 IPR034333 -
Vivi1g00056 221 SUPERFAMILY Thioredoxin-like 11 94 IPR036249 -
Vivi1g00056 221 PANTHER MALEYLACETOACETATE ISOMERASE 12 219 - -
Vivi1g00056 221 Pfam Glutathione S-transferase, C-terminal domain 138 208 IPR004046 -
Vivi1g00056 221 FunFam Glutathione S-transferase Z1 10 94 - -
Vivi1g00056 221 Gene3D - 95 220 - -
Vivi1g00056 221 SUPERFAMILY GST C-terminal domain-like 91 218 IPR036282 -
Vivi1g00056 221 SFLD Glutathione Transferase (cytosolic) 12 200 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00056 Vivi-Chr1 1304052 1307849 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00056 12 218 Glutathione S-transferase Gene Family AT2G02380 61.836 5.69e-96 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00056 K01800 - gmx:547590 349.362