Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00016 ATGGCTCTCATCCTGCATACTGGTGAAGGCAACAAAAATGCTTACAAGGCACTCATTGCTGCCGAGTATGCTTCTGTCCAAGTCCAGTACACCCCTAACTTTGAATTTGGTGTCTCCAATAAAACACCTCAATTCCTCAAAATGAATCCTCTCGGCAAGGTTCCCGTTTTGGAAACCCCTCACGGCCCTGTCTTCGAGAGCAACGCTATTGCTCGTTATGTTGCTCGATCCAAGGATGACAACACTCTCTATGGATCTTCTCTCATCGAATATGCTCAAGTTGAACAATGGATTGATTTTTCATCATTGGAAGTTGATTCCAACATTCTTAGGTGGTACTACCCTAGATTGGGATATGGACCATACCTTCCTCCGGCCGAGGAGAGTGCAATTACTGGACTCAAGAGAGCTTTGACTGCTTTGAACACTCACCTTGCCTCCAACACTTACCTGGTTGGCCATTCTGTCACCCTCGCTGACATCATTATGATAAGCAATTTGTATTTTGGTTTCACCAAAATCTTGGTCAAGACCTTCACCTCTGAGTATCCTCATGTCGAGAGGTACTTCTGGACCTTGGTCAACCAGCCAAACTTCCGCAAGATTTTAGGCCAGGTCAAGCAGGCTGAAGCTGTACCACCGGTTCAATCTGCAAAGAAGCCTGCCCAGGCAAAGGACTCTAAGCCCAAGGACGAACCAAAGAAGGAGGCCAAGAAGGTTGCAGAAAAGCCCAAAGAAGCAGAGGCTGAAGAGGAGGCTCCCAAGCCCAAACCCAAGAATCCACTTGATCTTCTTCCTCCTAGTAAGATGGTACTGGATGAATGGAAAAGACTTTACTCAAACACTAAATCCAACTTCAGGGAGGTTGCAATCAAAGGATTTTGGGATATGTATGATCCTGAAGGATACTCTCTCTGGTTCTGTGATTACAAATACCAAGATGAGAACACTGTTTCCTTTGTGACTTTGAACAAGGTCGGTGGATTTCTTCAGAGGATGGATTTGGCCCGCAAGTATGCATTTGGAAAGATGCTTATCATTGGATCTGAGCCACCTTTTAAGGTGAAGGGATTGTGGTTGTTCCGTGGGCAAGAAATCCCAAAATTTGTGATGGAAGAATGCTATGACATGGAGCTGTATGAGTGGACTAAGGTGGACATATCAGACGAAGCTCAGAAGGAGCGTGTGAGTCAGATGATTGAAGATTTTGAACCTTTTGAGGGAGAGTCTCTTTTGGATGCCAAGTGCTTCAAGTGA 1257 0.4535 MALILHTGEGNKNAYKALIAAEYASVQVQYTPNFEFGVSNKTPQFLKMNPLGKVPVLETPHGPVFESNAIARYVARSKDDNTLYGSSLIEYAQVEQWIDFSSLEVDSNILRWYYPRLGYGPYLPPAEESAITGLKRALTALNTHLASNTYLVGHSVTLADIIMISNLYFGFTKILVKTFTSEYPHVERYFWTLVNQPNFRKILGQVKQAEAVPPVQSAKKPAQAKDSKPKDEPKKEAKKVAEKPKEAEAEEEAPKPKPKNPLDLLPPSKMVLDEWKRLYSNTKSNFREVAIKGFWDMYDPEGYSLWFCDYKYQDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLIIGSEPPFKVKGLWLFRGQEIPKFVMEECYDMELYEWTKVDISDEAQKERVSQMIEDFEPFEGESLLDAKCFK 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00016 418 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 418 IPR044628 GO:0004364
Vivi1g00016 418 CDD GST_N_EF1Bgamma 5 77 - -
Vivi1g00016 418 SFLD Main (cytGST) 5 190 - -
Vivi1g00016 418 CDD GST_C_EF1Bgamma_like 90 210 - -
Vivi1g00016 418 Gene3D - 80 216 - -
Vivi1g00016 418 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 258 418 IPR001662 GO:0003746|GO:0006414
Vivi1g00016 418 MobiDBLite consensus disorder prediction 223 258 - -
Vivi1g00016 418 Pfam Glutathione S-transferase, N-terminal domain 2 76 IPR004045 -
Vivi1g00016 418 FunFam Elongation factor 1B gamma 1 74 - -
Vivi1g00016 418 Pfam Glutathione S-transferase, C-terminal domain 129 197 IPR004046 -
Vivi1g00016 418 SUPERFAMILY eEF1-gamma domain 258 418 IPR036433 GO:0003746|GO:0006414
Vivi1g00016 418 Gene3D Glutaredoxin 1 74 - -
Vivi1g00016 418 Pfam Elongation factor 1 gamma, conserved domain 257 365 IPR001662 GO:0003746|GO:0006414
Vivi1g00016 418 MobiDBLite consensus disorder prediction 212 265 - -
Vivi1g00016 418 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Vivi1g00016 418 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 215 IPR010987 -
Vivi1g00016 418 SMART EF1G_2 257 365 IPR001662 GO:0003746|GO:0006414
Vivi1g00016 418 FunFam Elongation factor 1 gamma 80 216 - -
Vivi1g00016 418 SFLD Glutathione Transferase (cytosolic) 5 190 IPR040079 -
Vivi1g00016 418 FunFam Elongation factor 1-gamma 1 258 418 - -
Vivi1g00016 418 SUPERFAMILY Thioredoxin-like 2 85 IPR036249 -
Vivi1g00016 418 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 258 418 IPR036433 GO:0003746|GO:0006414
Vivi1g00016 418 SUPERFAMILY GST C-terminal domain-like 73 214 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00016 Vivi-Chr1 340654 342839 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi1g00016 1 418 Eukaryotic Initiation Factors Gene Family AT1G57720 75.120 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00016 K03233 - gmx:547637 681.404