Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g00001 ATGGTGAAGAATCTGCTTAAGCAAATCGGTTTTGAAGATGAGTTCGGTTTGAAGGTGGATCAGCAAAGTGAGGAAGAGTTGAGTTTCAGCTCTGTAACTCTGGGATTGGAGGAATTTGCAGATTTGGTTAAATGTTTCGTTTCAGATGCGATGAAGGTTACATTATTCGGCTGGTGGCTCGTTAAATCCCCAGATAACCGTTTATGCATCTCTGGCAACGCTTCCAGAAAGGGAGAAGCCGTCCGCGTGTTTAATTCTTCTCCTATTGTCGAAAGATACGATGTGTATTCCCTTAAGAATGCCGAGGGTATATACATTTTCATTAGGGGTATCATCAATGAGGAACGCACCCGCGAAAAAGGTTTTACTCCTGAGATTTTCAATAGTTTTTACCTTGGCTTTCCTCCAAACTGGGAAACTTGTTGGGTTTTACATTGTATCAGAGATGAACAAGTAGAACCTGGTACTGATTCAGTCAATGCTGCTATGGATAATGTATCTCCAATTTGTCAAGACATTTTGTTTGACGATGAGGAAGAATCCATTTCTGTTTTGTCGAAATTGCCTGAAGAAGCCCCAGAAAATAACCAGACACCATTCCCTGGAGATGAATGCCAAGTGTCAAAGGAGACGAGTGGGGTAAATGTTGTTTTAAAAAATGGATTCACTCCCTTTAAGGCTATTATTACATATAATTTAATTGCAAAGAAGGCTATTATTACAAATAAGGCTAGTTACAAAAAGACTATTATTACATAA 759 0.3913 MVKNLLKQIGFEDEFGLKVDQQSEEELSFSSVTLGLEEFADLVKCFVSDAMKVTLFGWWLVKSPDNRLCISGNASRKGEAVRVFNSSPIVERYDVYSLKNAEGIYIFIRGIINEERTREKGFTPEIFNSFYLGFPPNWETCWVLHCIRDEQVEPGTDSVNAAMDNVSPICQDILFDDEEESISVLSKLPEEAPENNQTPFPGDECQVSKETSGVNVVLKNGFTPFKAIITYNLIAKKAIITNKASYKKTIIT 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g00001 252 Pfam SANTA (SANT Associated) 53 140 IPR015216 -
Vivi1g00001 252 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 52 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g00001 Vivi-Chr1 118967 123246 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi1g00001 SANTA 2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g00001 - - vvo:131644050 511.531