Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi198g00001 ATGTCAAGGGCTCCGATTTTCATCAAGGATTTGGTCAAAGGAAACCAAGTTTGGAAGATGCAGGTAAGGGTTGTTGATTTGTGGGTCGTTAAGGAGAAAACCGGACAGAAACACGTCGAGTTGGTTATTCAGGATGTTAAGGGCGATCAAATTCACGTCACCACCCGGAGCCGAGATTTCAAAGATTGGATTGATCAAGTGAAAGAACATGAAACATATACACTTCATAATGGAGAGCCTGTTGTTAATGATGGAGCCTTGAAAGTTTGTTCTAACCCACTCAAGATTGTCTTCAATGGAGGGACTGCCATGACAAATGTTGCGTTTCCCGACATACCCCATCACAAATACAACTTTCACCCTATAGAGAACTTTCTCAAAGGAAGCTTCAAGCCTGATATGCTTTATGATGTCATAGGTGTTTTTCATGAAGTCCTTAGGTCACAGATGGGAGGAGATGGTAGGAAGTCTTGCGTTAATATCACTTTACGTGATGTTGAAGGAAACGTGATTGAGGTTGTGTTATGGGATGATTACTGCAAGCAATTCTCGACCTACAATACCTCTGGCACACAGAAAAAAAGTCCTACAATCATTGTGTTGACACATGCATGGTGCAAGCCAAACAAAGTTTCTGGTTTACCATCTCTCTCTAATGCTTGGAATGGTTCTCGACTCCTCATCAACTTGGAACATCCACAAGTGGAAGAATTCAAAGCTAGCTATCTTGCAAATGATTCATCCAATGGCCCTGCGCTTTCCTTGTCTTTAACCTGTGATTCATCTCTTCAATCGGCTAACAAGAATTGGAAGAGTCTCGACGAGGTCCAAAGTATCCGTGCAATTGTTGAGTCCAAAAAGGATTGTTATGCAACCACTATTGGAACTACAAAGTTTTTCAAAGCTTCCAAGTTTGGCTGGTTTTTTGAAGCATGCCCAGGCTGTAAAGCTTCTAACAAGTCACTCGGCGAAACATTTCAATGTTCGTGCGGAATTTCCAATGTTGAACCTGTGACTAAATTCAAAATTGAGGTCGAGGTTGTGTATGAAGACTACAGTGGTACTTTTGTTTTTTGGGACAAGGATGTTATTCCTTACACAAAATTTAATGCGAAGGAACTGAAACAACTTATGAAAGAGGCAGGAGAGGAAAACCCGAAGATTTGGCCTTCACATCTCGATGTACTTTTGAATAAAGACTTGGTCTTCCGCGTCAAATATCAATCTGATTTCGGTCAATTCTCTATTGTCACTATACTTAACGAGGACAACTTATACAAGAAGTTTGACAACTACCTCACACCTAATGAGCAAGAATCAATTGAAGCTGTTAAAGAAATTCCGGCAAATGGTGTTACTGAGGAACCTATCCAACCTAATGGAACACCAATTTCTGAACCAACCGAATCTGCTCCGATGTCCGTTGCTGGCAACACTTCTGGGAGTCCTACTGCAAGCTCTAGCACTACTCCAGCCAAGAGGTTTGCTCCATCAACCTCTATCAATGATGCCATGTTATCTGAAGAAATCACACCCAAGCAGTCTGCCACTAAAGCCAAGCCTATCAGGAAGACTAAGTTGATTAAGAAGGAGTAA 1596 0.416 MSRAPIFIKDLVKGNQVWKMQVRVVDLWVVKEKTGQKHVELVIQDVKGDQIHVTTRSRDFKDWIDQVKEHETYTLHNGEPVVNDGALKVCSNPLKIVFNGGTAMTNVAFPDIPHHKYNFHPIENFLKGSFKPDMLYDVIGVFHEVLRSQMGGDGRKSCVNITLRDVEGNVIEVVLWDDYCKQFSTYNTSGTQKKSPTIIVLTHAWCKPNKVSGLPSLSNAWNGSRLLINLEHPQVEEFKASYLANDSSNGPALSLSLTCDSSLQSANKNWKSLDEVQSIRAIVESKKDCYATTIGTTKFFKASKFGWFFEACPGCKASNKSLGETFQCSCGISNVEPVTKFKIEVEVVYEDYSGTFVFWDKDVIPYTKFNAKELKQLMKEAGEENPKIWPSHLDVLLNKDLVFRVKYQSDFGQFSIVTILNEDNLYKKFDNYLTPNEQESIEAVKEIPANGVTEEPIQPNGTPISEPTESAPMSVAGNTSGSPTASSSTTPAKRFAPSTSINDAMLSEEITPKQSATKAKPIRKTKLIKKE 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi198g00001 531 PANTHER OS03G0429900 PROTEIN 6 496 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Vivi198g00001 531 MobiDBLite consensus disorder prediction 450 531 - -
Vivi198g00001 531 CDD RPA1_DBD_A_like 19 102 - -
Vivi198g00001 531 Gene3D - 6 108 IPR012340 -
Vivi198g00001 531 SUPERFAMILY Nucleic acid-binding proteins 117 243 IPR012340 -
Vivi198g00001 531 CDD RPA1_DBD_B_like 137 242 - -
Vivi198g00001 531 SUPERFAMILY Nucleic acid-binding proteins 268 416 IPR012340 -
Vivi198g00001 531 SUPERFAMILY Nucleic acid-binding proteins 7 105 IPR012340 -
Vivi198g00001 531 MobiDBLite consensus disorder prediction 455 514 - -
Vivi198g00001 531 Gene3D - 110 250 IPR012340 -
Vivi198g00001 531 Gene3D - 256 432 IPR012340 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi198g00001 5 405 Core DNA Replication Machinery Family AT5G61000 23.380 1.72e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi198g00001 - - vvo:131652505 743.806